RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 KIAA0319Q5VV43 1072 aa13.16□□□□□ -0.3
SNRNP200-206ENST00000484372 C4orf32Q8N8J7 132 aa13.16□□□□□ -0.3
SNRNP200-206ENST00000484372 IGSF22Q8N9C0 903 aa13.16□□□□□ -0.3
SNRNP200-206ENST00000484372 CMASQ8NFW8 434 aaPredicted RBP13.16□□□□□ -0.3
SNRNP200-206ENST00000484372 PLEKHA4Q9H4M7 779 aa13.16□□□□□ -0.3
SNRNP200-206ENST00000484372 PDZD7Q9H5P4 517 aa13.16□□□□□ -0.3
SNRNP200-206ENST00000484372 MAN1C1Q9NR34 630 aa13.16□□□□□ -0.3
SNRNP200-206ENST00000484372 CHST7Q9NS84 486 aa13.16□□□□□ -0.3
SNRNP200-206ENST00000484372 SNTG2Q9NY99 539 aa13.16□□□□□ -0.3
SNRNP200-206ENST00000484372 CDH22Q9UJ99 828 aa13.16□□□□□ -0.3
SNRNP200-206ENST00000484372 CCDC169A6NNP5 214 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 PTPN5P54829 565 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 ATF7IP2Q5U623 682 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 KANK3Q6NY19 840 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 PDXDC1Q6P996 788 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 TAS1R1Q7RTX1 841 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 RNF168Q8IYW5 571 aaPredicted RBP13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 KCTD17Q8N5Z5 321 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 GSTCDQ8NEC7 633 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 RIN2Q8WYP3 895 aaPredicted RBP13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 BSNDQ8WZ55 320 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 DRC1Q96MC2 740 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 TIPINQ9BVW5 301 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 CCDC113Q9H0I3 377 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 IRF2BPLQ9H1B7 796 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 PIDD1Q9HB75 910 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 FNIP2Q9P278 1114 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 LIMD1Q9UGP4 676 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 PCDHB6Q9Y5E3 794 aa13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 TDRD15B5MCY1 1934 aaKnown RBP13.15□□□□□ -0.3
SNRNP200-206ENST00000484372 CCDC195A0A1B0GUA6 201 aa13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 RECQL4O94761 1208 aa13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 TOB1P50616 345 aaPredicted RBP13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 YARSP54577 528 aaKnown RBP13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 PEX3P56589 373 aa13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 ZRSR1Q15695 479 aaKnown RBP13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 ECM1Q16610 540 aa13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 PALB2Q86YC2 1186 aa13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 ASIC4Q96FT7 647 aa13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 RHOBTB2Q9BYZ6 727 aa13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 GPR62Q9BZJ7 368 aa13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 NT5C3AQ9H0P0 336 aa13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 C17orf75Q9HAS0 396 aa13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 TOPORSQ9NS56 1045 aaPredicted RBP13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 GDAQ9Y2T3 454 aa13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 RBM19Q9Y4C8 960 aaKnown RBP13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.14□□□□□ -0.31
SNRNP200-206ENST00000484372 CASTOR2A6NHX0 329 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 E9PMD0 336 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 CD2BP2O95400 341 aaKnown RBP13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 EFEMP2O95967 443 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 GJB2P29033 226 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 NUBP1P53384 320 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 SMTNP53814 917 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 NHLH1Q02575 133 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 FAM171A1Q5VUB5 890 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 CEP57Q86XR8 500 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 SMG7Q92540 1137 aaKnown RBP13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 TCHPQ9BT92 498 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 TTPALQ9BTX7 342 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 KIFC3Q9BVG8 833 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 CCDC94Q9BW85 323 aaPredicted RBP13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 MRPL4Q9BYD3 311 aaKnown RBP13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 MFSD1Q9H3U5 465 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 TMEM134Q9H6X4 195 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 KMT5AQ9NQR1 393 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 ZDHHC7Q9NXF8 308 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 SMC3Q9UQE7 1217 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 TNFSF13BQ9Y275 285 aa13.13□□□□□ -0.31
SNRNP200-206ENST00000484372 ZDBF2Q9HCK1 2354 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 TTLL13PA6NNM8 815 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 F8W810 466 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 TGM5O43548 720 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 TRAPPC3O43617 180 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 HIP1RO75146 1068 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 BRD1O95696 1058 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 ASGR2P07307 311 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 AVPR2P30518 371 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 GBP2P32456 591 aaPredicted RBP13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 ATP2C1P98194 919 aaPredicted RBP13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 STRN3Q13033 797 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 LIN9Q5TKA1 542 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 EEF1DP3Q658K8 133 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 ALYREFQ86V81 257 aaKnown RBP13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 GLYCTKQ8IVS8 523 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 RABGGTAQ92696 567 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 SNX21Q969T3 373 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 B3GALT6Q96L58 329 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 UROC1Q96N76 676 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 POLD4Q9HCU8 107 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 WDR6Q9NNW5 1121 aaKnown RBP13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 SLC38A7Q9NVC3 462 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 IGSF9Q9P2J2 1179 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 TRIOO75962 3097 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 PIEZO1Q92508 2521 aa13.12□□□□□ -0.31
SNRNP200-206ENST00000484372 ZNF318Q5VUA4 2279 aa13.11□□□□□ -0.31
SNRNP200-206ENST00000484372 MYO10Q9HD67 2058 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms