RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TMEM161BQ8NDZ6 487 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 HASPINQ8TF76 798 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 LARP4BQ92615 738 aaKnown RBP13.49□□□□□ -0.25
MSH5-216ENST00000484309 ZBTB45Q96K62 511 aaPredicted RBP13.49□□□□□ -0.25
MSH5-216ENST00000484309 CDCA3Q99618 268 aaPredicted RBP13.49□□□□□ -0.25
MSH5-216ENST00000484309 PAAF1Q9BRP4 392 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 MRPL4Q9BYD3 311 aaKnown RBP13.49□□□□□ -0.25
MSH5-216ENST00000484309 CDT1Q9H211 546 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 C17orf75Q9HAS0 396 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 KCND2Q9NZV8 630 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 ANKFY1Q9P2R3 1169 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 TNFSF13BQ9Y275 285 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 C5orf42Q9H799 3197 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 CARNS1A5YM72 827 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 K7ENM7 598 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 MAPTP10636 758 aaKnown RBP13.48□□□□□ -0.25
MSH5-216ENST00000484309 SSTR3P32745 418 aaPredicted RBP13.48□□□□□ -0.25
MSH5-216ENST00000484309 NASPP49321 788 aaPredicted RBP13.48□□□□□ -0.25
MSH5-216ENST00000484309 SMTNP53814 917 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 STRN3Q13033 797 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 GIT2Q14161 759 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 BMS1Q14692 1282 aaKnown RBP13.48□□□□□ -0.25
MSH5-216ENST00000484309 PTPN14Q15678 1187 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 MYCT1Q8N699 235 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 KRI1Q8N9T8 703 aaKnown RBP13.48□□□□□ -0.25
MSH5-216ENST00000484309 TMEM87AQ8NBN3 555 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 SPIRE2Q8WWL2 714 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 B3GALT6Q96L58 329 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 TCHPQ9BT92 498 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 PANK2Q9BZ23 570 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 DAXXQ9UER7 740 aaPredicted RBP13.48□□□□□ -0.25
MSH5-216ENST00000484309 CCDC39Q9UFE4 941 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 CDH22Q9UJ99 828 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 RBM19Q9Y4C8 960 aaKnown RBP13.48□□□□□ -0.25
MSH5-216ENST00000484309 HCFC2Q9Y5Z7 792 aa13.48□□□□□ -0.25
MSH5-216ENST00000484309 ZMYM2Q9UBW7 1377 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 DENND4AQ7Z401 1863 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 A0A087X0B3 334 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 TBCAO75347 108 aaKnown RBP13.47□□□□□ -0.25
MSH5-216ENST00000484309 NR1I2O75469 434 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 F13A1P00488 732 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 SOD2P04179 222 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 SRGAP2BP0DMP2 458 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 ZSCAN22P10073 491 aaPredicted RBP13.47□□□□□ -0.25
MSH5-216ENST00000484309 TXLNAP40222 546 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 NCKAP1LP55160 1127 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 COASYQ13057 564 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 TUSC3Q13454 348 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 KCNC3Q14003 757 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 SMAD2Q15796 467 aaKnown RBP13.47□□□□□ -0.25
MSH5-216ENST00000484309 SEZ6Q53EL9 994 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 RRAGBQ5VZM2 374 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 ANKRD54Q6NXT1 300 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 DYMQ7RTS9 669 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 HAUS6Q7Z4H7 955 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 APBB1IPQ7Z5R6 666 aaPredicted RBP13.47□□□□□ -0.25
MSH5-216ENST00000484309 PDILTQ8N807 584 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 SMRP1Q8NCR6 262 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 KHSRPQ92945 711 aaKnown RBP eCLIP13.47□□□□□ -0.25
MSH5-216ENST00000484309 BICD1Q96G01 975 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 ZNF396Q96N95 335 aaPredicted RBP13.47□□□□□ -0.25
MSH5-216ENST00000484309 HERC2P3Q9BVR0 1158 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 COLEC11Q9BWP8 271 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 PTPRHQ9HD43 1115 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 LARSQ9P2J5 1176 aaKnown RBP13.47□□□□□ -0.25
MSH5-216ENST00000484309 ODF2LQ9ULJ1 636 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 FAM50BQ9Y247 325 aa13.47□□□□□ -0.25
MSH5-216ENST00000484309 USP15Q9Y4E8 981 aaPredicted RBP13.47□□□□□ -0.25
MSH5-216ENST00000484309 ABLIM1O14639 778 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 SPTLC2O15270 562 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 URODP06132 367 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 THP07101 528 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 EPCAMP16422 314 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 PROZP22891 400 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 NMT1P30419 496 aaKnown RBP13.46□□□□□ -0.25
MSH5-216ENST00000484309 DDIT3P35638 169 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 GRM5P41594 1212 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 MATR3P43243 847 aaKnown RBP eCLIP13.46□□□□□ -0.25
MSH5-216ENST00000484309 GLUD2P49448 558 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 ZP2Q05996 745 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 HSP90AA2PQ14568 343 aaPredicted RBP13.46□□□□□ -0.25
MSH5-216ENST00000484309 NAB2Q15742 525 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 KANK3Q6NY19 840 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 FUT10Q6P4F1 479 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 SYCE2Q6PIF2 218 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 MPZL3Q6UWV2 235 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 GJD3Q8N144 294 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 LINC00301Q8NCQ3 95 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 NTPCRQ9BSD7 190 aaKnown RBP13.46□□□□□ -0.25
MSH5-216ENST00000484309 CCDC94Q9BW85 323 aaPredicted RBP13.46□□□□□ -0.25
MSH5-216ENST00000484309 GPR62Q9BZJ7 368 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 PARVGQ9HBI0 331 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 GOLGA2P5Q9HBQ8 144 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 STK17AQ9UEE5 414 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 ADAM28Q9UKQ2 775 aa13.46□□□□□ -0.25
MSH5-216ENST00000484309 DOCK6Q96HP0 2047 aa13.46□□□□□ -0.26
MSH5-216ENST00000484309 FSD2A1L4K1 749 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 TRAK2O60296 914 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 TADA2AO75478 443 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 KIF4AO95239 1232 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms