RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 TBCAO75347 108 aaKnown RBP7.59□□□□□ -1.19
BRCA1-216ENST00000484087 OFD1O75665 1012 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 EYA4O95677 639 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 P4HBP07237 508 aaKnown RBP7.59□□□□□ -1.19
BRCA1-216ENST00000484087 LINC00271P0C7V0 271 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 SPATA31C1P0DKV0 1188 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 PBX3P40426 434 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 COPB1P53618 953 aaKnown RBP7.59□□□□□ -1.19
BRCA1-216ENST00000484087 POLGP54098 1239 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-216ENST00000484087 HTRA4P83105 476 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-216ENST00000484087 LRMPQ12912 555 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 COASYQ13057 564 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 EMC2Q15006 297 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 KRT31Q15323 416 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 HERC4Q5GLZ8 1057 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-216ENST00000484087 FAM26FQ5R3K3 315 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 FAM102BQ5T8I3 360 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 FOXR2Q6PJQ5 311 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 KCNK18Q7Z418 384 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 RNF169Q8NCN4 708 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 RDM1Q8NG50 284 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 ASAP3Q8TDY4 903 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 APBB2Q92870 758 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 NACC1Q96RE7 527 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 MED15Q96RN5 788 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 MAP7D2Q96T17 732 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 GAS2L1Q99501 681 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-216ENST00000484087 RAD9AQ99638 391 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 ADAM2Q99965 735 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 SLC4A5Q9BY07 1137 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 NIFKQ9BYG3 293 aaKnown RBP7.59□□□□□ -1.19
BRCA1-216ENST00000484087 ZHX3Q9H4I2 956 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 MINDY3Q9H8M7 445 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 RC3H2Q9HBD1 1191 aaKnown RBP7.59□□□□□ -1.19
BRCA1-216ENST00000484087 SPTLC3Q9NUV7 552 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 SUCLA2Q9P2R7 463 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-216ENST00000484087 PYCARDQ9ULZ3 195 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 USP20Q9Y2K6 914 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 ITIH6Q6UXX5 1313 aa7.59□□□□□ -1.2
BRCA1-216ENST00000484087 ADGRA3Q8IWK6 1321 aa7.59□□□□□ -1.2
BRCA1-216ENST00000484087 IGKV6-21A0A0C4DH24 114 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 DENND3A2RUS2 1198 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 TRIM49BA6NDI0 452 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 LRRC10BA6NIK2 292 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 AKR1B15C9JRZ8 316 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-216ENST00000484087 MAFO75444 373 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-216ENST00000484087 SRGAP2CP0DJJ0 459 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 GAP43P17677 238 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 CYP11B2P19099 503 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 MTIF2P46199 727 aaKnown RBP7.58□□□□□ -1.2
BRCA1-216ENST00000484087 RARRES1P49788 294 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 DNM2P50570 870 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 CRYBB1P53674 252 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-216ENST00000484087 SLC12A3P55017 1021 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 FKBP15Q5T1M5 1219 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 CENPPQ6IPU0 288 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 TTI2Q6NXR4 508 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 STXBP4Q6ZWJ1 553 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 CDR2LQ86X02 465 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-216ENST00000484087 CNGA4Q8IV77 575 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 C4orf19Q8IY42 314 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 KIAA0895Q8NCT3 520 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 LPPQ93052 612 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 DNAJC19Q96DA6 116 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 CCDC51Q96ER9 411 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 CCDC43Q96MW1 224 aaKnown RBP7.58□□□□□ -1.2
BRCA1-216ENST00000484087 HSD17B14Q9BPX1 270 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 VPS16Q9H269 839 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 BHMT2Q9H2M3 363 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 RNF19AQ9NV58 838 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 KCND2Q9NZV8 630 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 PCDHGC5Q9Y5F6 944 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 COL4A3BPQ9Y5P4 624 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 MRPL42Q9Y6G3 142 aaKnown RBP7.58□□□□□ -1.2
BRCA1-216ENST00000484087 MYH11P35749 1972 aa7.58□□□□□ -1.2
BRCA1-216ENST00000484087 BRWD1Q9NSI6 2320 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 ARHGEF35A5YM69 484 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 KIF2AO00139 706 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 MAGEB2O15479 319 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 DKC1O60832 514 aaKnown RBP eCLIP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 EFCAB14O75071 495 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 DGKIO75912 1065 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 FAM13AO94988 1023 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 GNA14O95837 355 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 EDN1P05305 212 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 DARSP14868 501 aaKnown RBP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 ATF7P17544 494 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 EIF4BP23588 611 aaKnown RBP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 CTNNB1P35222 781 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 CCZ1BP86790 482 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 CCZ1P86791 482 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 TFF2Q03403 129 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 UBXN1Q04323 297 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 EHHADHQ08426 723 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 CAPSQ13938 189 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 BTG3Q14201 252 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 DSC3Q14574 896 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 TSR1Q2NL82 804 aaKnown RBP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 EPC2Q52LR7 807 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 ANKRD40Q6AI12 368 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms