RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 ARL2P36404 184 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 RFC5P40937 340 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 PRKCQQ04759 706 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 POU5F1BQ06416 359 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 MTAPQ13126 283 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 CAPSQ13938 189 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 EMC2Q15006 297 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 SLC5A9Q2M3M2 681 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 RNF20Q5VTR2 975 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 CDR2LQ86X02 465 aaPredicted RBP9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 NPAS3Q8IXF0 933 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 C4orf19Q8IY42 314 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 CCDC148Q8NFR7 591 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 SLC7A3Q8WY07 619 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 BORCS6Q96GS4 357 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 CEP170P1Q96L14 293 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 KXD1Q9BQD3 176 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 COLEC11Q9BWP8 271 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 BCO2Q9BYV7 579 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 ZSCAN32Q9NX65 697 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 KLK14Q9P0G3 267 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 DNMT3BQ9UBC3 853 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 DDX25Q9UHL0 483 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 SMG5Q9UPR3 1016 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 GIT1Q9Y2X7 761 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 SNX14Q9Y5W7 946 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 SPEGQ15772 3267 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 CHD8Q9HCK8 2581 aa9.62□□□□□ -0.87
RTFDC1-208ENST00000484084 CCL16O15467 120 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 LAMTOR5O43504 91 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 SLITRK3O94933 977 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 EDN1P05305 212 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 P4HBP07237 508 aaKnown RBP9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 C8AP07357 584 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 POU2F2P09086 479 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 HMGB1P09429 215 aaKnown RBP9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 HNRNPA1P09651 372 aaKnown RBP eCLIP9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 GLRA2P23416 452 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 AXLP30530 894 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 HOXA9P31269 272 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 HOXC13P31276 330 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 HSPA4P34932 840 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 RPS9P46781 194 aaKnown RBP9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 CCT2P78371 535 aaKnown RBP9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 TOB2Q14106 344 aaPredicted RBP9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 UBXN2BQ14CS0 331 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 INF2Q27J81 1249 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 BMP2KLQ5H9B9 411 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 EARS2Q5JPH6 523 aaKnown RBP9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 WDR44Q5JSH3 913 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 NOTUMQ6P988 496 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 MAMSTRQ6ZN01 415 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 BLIDQ8IZY5 108 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 HASPINQ8TF76 798 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 PIK3R5Q8WYR1 880 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 CCDC51Q96ER9 411 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 SHDQ96IW2 340 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 HSD17B14Q9BPX1 270 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 JPH2Q9BR39 696 aaPredicted RBP9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 LXNQ9BS40 222 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 NFKBIZQ9BYH8 718 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 NAP1L2Q9ULW6 460 aaPredicted RBP9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 PPME1Q9Y570 386 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 FRYQ5TBA9 3013 aa9.61□□□□□ -0.87
RTFDC1-208ENST00000484084 NCANO14594 1321 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 ASAP2O43150 1006 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 RFX1P22670 979 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 RPS6KB1P23443 525 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 NLRP5P59047 1200 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 GRIK3Q13003 919 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 RAB33AQ14088 237 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 CTTNQ14247 550 aaKnown RBP9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 GAS6Q14393 721 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 KRT32Q14532 448 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 HSP90AA2PQ14568 343 aaPredicted RBP9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 PCBP1Q15365 356 aaKnown RBP eCLIP9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 PPP4R3AQ6IN85 833 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 ATRIPQ8WXE1 791 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 DYDC2Q96IM9 177 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 JAKMIP1Q96N16 626 aaKnown RBP9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 APOL6Q9BWW8 343 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 HEBP1Q9NRV9 189 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 GJB4Q9NTQ9 266 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 NCDNQ9UBB6 729 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 ZMYM2Q9UBW7 1377 aa9.6□□□□□ -0.87
RTFDC1-208ENST00000484084 A0A087WWV3 80 aa9.59□□□□□ -0.87
RTFDC1-208ENST00000484084 FAM205CA6NFA0 338 aa9.59□□□□□ -0.87
RTFDC1-208ENST00000484084 PRR5-ARHGAP8B1AHC4 643 aa9.59□□□□□ -0.87
RTFDC1-208ENST00000484084 DTNBO60941 627 aa9.59□□□□□ -0.87
RTFDC1-208ENST00000484084 TADA2AO75478 443 aa9.59□□□□□ -0.87
RTFDC1-208ENST00000484084 ECI2O75521 394 aa9.59□□□□□ -0.87
RTFDC1-208ENST00000484084 ERLIN2O94905 339 aa9.59□□□□□ -0.87
RTFDC1-208ENST00000484084 NPTXRO95502 500 aa9.59□□□□□ -0.87
RTFDC1-208ENST00000484084 FGFR3P22607 806 aa9.59□□□□□ -0.87
RTFDC1-208ENST00000484084 IRX6P78412 446 aaPredicted RBP9.59□□□□□ -0.87
RTFDC1-208ENST00000484084 ARHGAP8P85298 464 aa9.59□□□□□ -0.87
RTFDC1-208ENST00000484084 LMNB2Q03252 620 aa9.59□□□□□ -0.87
RTFDC1-208ENST00000484084 DMWDQ09019 674 aa9.59□□□□□ -0.87
RTFDC1-208ENST00000484084 TUSC3Q13454 348 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms