RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 ARL2P36404 184 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 NPTX2P47972 431 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 NPEPPSP55786 919 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 TUBB4BP68371 445 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 ZXDAP98168 799 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 POU5F1BQ06416 359 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 KCNA1Q09470 495 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 CETN1Q12798 172 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 LAMC2Q13753 1193 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 RSPO4Q2I0M5 234 aaPredicted RBP5.9□□□□□ -1.46
COL17A1-206ENST00000483876 FAM102BQ5T8I3 360 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 UTP14CQ5TAP6 766 aaKnown RBP5.9□□□□□ -1.46
COL17A1-206ENST00000483876 KIAA0319Q5VV43 1072 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 IER5Q5VY09 327 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 IQSEC1Q6DN90 963 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 DPY19L2P1Q6NXN4 242 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 RAD9BQ6WBX8 426 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 GBP6Q6ZN66 633 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 GPR142Q7Z601 462 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 PLEKHH3Q7Z736 793 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 USP37Q86T82 979 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 MAP4K3Q8IVH8 894 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 CCDC60Q8IWA6 550 aaPredicted RBP5.9□□□□□ -1.46
COL17A1-206ENST00000483876 SYCP3Q8IZU3 236 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 XXYLT1Q8NBI6 393 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 MYRIPQ8NFW9 859 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 SCFD2Q8WU76 684 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 SLC7A3Q8WY07 619 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 BAP1Q92560 729 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 EMID1Q96A84 441 aaPredicted RBP5.9□□□□□ -1.46
COL17A1-206ENST00000483876 EEF2KMTQ96G04 330 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 IFT74Q96LB3 600 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 PCMTD1Q96MG8 357 aaPredicted RBP5.9□□□□□ -1.46
COL17A1-206ENST00000483876 CEP89Q96ST8 783 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 GPR20Q99678 358 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 PPP1R12CQ9BZL4 782 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 PORCNQ9H237 461 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 SMARCAD1Q9H4L7 1026 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 HAUS4Q9H6D7 363 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 AZI2Q9H6S1 392 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 BCAS3Q9H6U6 928 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 TMEM134Q9H6X4 195 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 MMRN2Q9H8L6 949 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 MLXIPQ9HAP2 919 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 KIAA1586Q9HCI6 787 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 VTA1Q9NP79 307 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 KMT5AQ9NQR1 393 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 AGPAT5Q9NUQ2 364 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 TRMT1Q9NXH9 659 aaKnown RBP5.9□□□□□ -1.46
COL17A1-206ENST00000483876 TBX20Q9UMR3 447 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 STYXL1Q9Y6J8 313 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 CACNA1HO95180 2353 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 IGKV6-21A0A0C4DH24 114 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 A0A1W2PQ45 241 aaPredicted RBP5.89□□□□□ -1.47
COL17A1-206ENST00000483876 A0A1W2PQY0 241 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 SOWAHDA6NJG2 315 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 CYSRT1A8MQ03 144 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 ZBBXA8MT70 800 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 RBAK-RBAKDNI3L0D1 243 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 K7ENM7 598 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 NKRFO15226 690 aaKnown RBP eCLIP5.89□□□□□ -1.47
COL17A1-206ENST00000483876 EXOC3O60645 756 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 PEX10O60683 326 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 USO1O60763 962 aaKnown RBP5.89□□□□□ -1.47
COL17A1-206ENST00000483876 N4BP1O75113 896 aaKnown RBP5.89□□□□□ -1.47
COL17A1-206ENST00000483876 GFPT2O94808 682 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 IPO7O95373 1038 aaKnown RBP5.89□□□□□ -1.47
COL17A1-206ENST00000483876 GGPS1O95749 300 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 PIGRP01833 764 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 PGK2P07205 417 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 TXNP10599 105 aaKnown RBP5.89□□□□□ -1.47
COL17A1-206ENST00000483876 CYBAP13498 195 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 KRT13P13646 458 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 PON1P27169 355 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 TCF7P36402 384 aaPredicted RBP5.89□□□□□ -1.47
COL17A1-206ENST00000483876 NAMPTP43490 491 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 EFNA5P52803 228 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 PEX3P56589 373 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 PRKCEQ02156 737 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 TAP1Q03518 808 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 GOLGA8FQ08AF8 430 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 GOLGA8DPQ0D2H9 430 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 MXD4Q14582 209 aaPredicted RBP5.89□□□□□ -1.47
COL17A1-206ENST00000483876 PTPN21Q16825 1174 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 EXOC3L4Q17RC7 722 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 C10orf76Q5T2E6 689 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 KLHDC7AQ5VTJ3 777 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 SFMBT2Q5VUG0 894 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 SLFN12LQ6IEE8 588 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 TAPT1Q6NXT6 567 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 PDXDC1Q6P996 788 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 TOGARAM2Q6ZUX3 1019 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 RRAGAQ7L523 313 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 CACNA2D4Q7Z3S7 1137 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 DHX37Q8IY37 1157 aaKnown RBP5.89□□□□□ -1.47
COL17A1-206ENST00000483876 FAM186BQ8IYM0 893 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 EHBP1Q8NDI1 1231 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 TMC2Q8TDI7 906 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 ATP8B4Q8TF62 1192 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 TCP11Q8WWU5 503 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms