RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 OLIG1Q8TAK6 271 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 UBE2TQ9NPD8 197 aaPredicted RBP15.2■□□□□ 0.02
CLK3-204ENST00000483723 RBAKQ9NYW8 714 aaPredicted RBP15.2■□□□□ 0.02
CLK3-204ENST00000483723 GUCA1BQ9UMX6 200 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 TFR2Q9UP52 801 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 ATP8B3O60423 1300 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 MBLAC1A4D2B0 266 aaPredicted RBP15.2■□□□□ 0.02
CLK3-204ENST00000483723 FOXN3O00409 490 aaPredicted RBP15.2■□□□□ 0.02
CLK3-204ENST00000483723 EVI5O60447 810 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 IQCF3P0C7M6 154 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 CCDC172P0C7W6 258 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 CPT1AP50416 773 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 KIF22Q14807 665 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 MPZL3Q6UWV2 235 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 GPIHBP1Q8IV16 184 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 SLC35F6Q8N357 371 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 TXLNBQ8N3L3 684 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 TRPV1Q8NER1 839 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 SLC30A5Q8TAD4 765 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 HELQQ8TDG4 1101 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 TAS1R2Q8TE23 839 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 CGRRF1Q99675 332 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 PDE11AQ9HCR9 933 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 ANKFY1Q9P2R3 1169 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 ADAMTS1Q9UHI8 967 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 CPSF3Q9UKF6 684 aaKnown RBP15.2■□□□□ 0.02
CLK3-204ENST00000483723 NRCAMQ92823 1304 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 A0A087WZ62 844 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 UQCRHLA0A096LP55 91 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 INO80B-WBP1J3KQ70 363 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 CTIFO43310 598 aaKnown RBP15.19■□□□□ 0.02
CLK3-204ENST00000483723 DUSP11O75319 330 aaKnown RBP15.19■□□□□ 0.02
CLK3-204ENST00000483723 UQCRHP07919 91 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 DLATP10515 647 aaKnown RBP15.19■□□□□ 0.02
CLK3-204ENST00000483723 AKR1A1P14550 325 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 NKX3-2P78367 333 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 POU5F1Q01860 360 aaKnown RBP15.19■□□□□ 0.02
CLK3-204ENST00000483723 PRPF4BQ13523 1007 aaKnown RBP15.19■□□□□ 0.02
CLK3-204ENST00000483723 DEFB115Q30KQ5 88 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 ATF7IP2Q5U623 682 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 KREMEN1Q96MU8 473 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 FNBP1Q96RU3 617 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 FDXACB1Q9BRP7 624 aaPredicted RBP15.19■□□□□ 0.02
CLK3-204ENST00000483723 CFHR5Q9BXR6 569 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 INO80BQ9C086 356 aaPredicted RBP15.19■□□□□ 0.02
CLK3-204ENST00000483723 ARHGAP39Q9C0H5 1083 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 AP5M1Q9H0R1 490 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 SETD4Q9NVD3 440 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 GABRQQ9UN88 632 aa15.19■□□□□ 0.02
CLK3-204ENST00000483723 PNMA6AP0CW24 399 aaPredicted RBP15.18■□□□□ 0.02
CLK3-204ENST00000483723 SMIM10L2AP0DMW4 78 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 SMIM10L2BP0DMW5 78 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 CYBAP13498 195 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 MATR3P43243 847 aaKnown RBP eCLIP15.18■□□□□ 0.02
CLK3-204ENST00000483723 PSEN2P49810 448 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 AP3M2P53677 418 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 IRX5P78411 483 aaPredicted RBP15.18■□□□□ 0.02
CLK3-204ENST00000483723 CDC42EP1Q00587 391 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 BMS1Q14692 1282 aaKnown RBP15.18■□□□□ 0.02
CLK3-204ENST00000483723 MFSD10Q14728 455 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 SURF1Q15526 300 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 NAB2Q15742 525 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 ARHGAP44Q17R89 818 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 KIAA0753Q2KHM9 967 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 EEF1DP3Q658K8 133 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 ZNF410Q86VK4 478 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 LMBR1Q8WVP7 490 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 SHC3Q92529 594 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 LENG1Q96BZ8 264 aaPredicted RBP15.18■□□□□ 0.02
CLK3-204ENST00000483723 ZNF668Q96K58 619 aaPredicted RBP15.18■□□□□ 0.02
CLK3-204ENST00000483723 FAM81BQ96LP2 452 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 NT5C1BQ96P26 610 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 TCHPQ9BT92 498 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 LUC7LQ9NQ29 371 aaKnown RBP15.18■□□□□ 0.02
CLK3-204ENST00000483723 NAGPAQ9UK23 515 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 AKT3Q9Y243 479 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 DUSP10Q9Y6W6 482 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 PTPRJQ12913 1337 aa15.18■□□□□ 0.02
CLK3-204ENST00000483723 SMIM35A0A1B0GVV1 85 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 DDX3XO00571 662 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLK3-204ENST00000483723 B4GALT5O43286 388 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 ZEB2O60315 1214 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 AOC2O75106 756 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 VTNP04004 478 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 TNNI1P19237 187 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 MFAP3P55082 362 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 TUBB2AQ13885 445 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 TDRD10Q5VZ19 366 aaKnown RBP15.17■□□□□ 0.02
CLK3-204ENST00000483723 SRGAP1Q7Z6B7 1085 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 ZBTB33Q86T24 672 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 FAM71AQ8IYT1 594 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 RNF10Q8N5U6 811 aaKnown RBP15.17■□□□□ 0.02
CLK3-204ENST00000483723 CAPNS2Q96L46 248 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 MAP7D2Q96T17 732 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 TUBB2BQ9BVA1 445 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 CASP8AP2Q9UKL3 1982 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 CEP350Q5VT06 3117 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 BTNL10A8MVZ5 291 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 KPNA6O60684 536 aa15.17■□□□□ 0.02
CLK3-204ENST00000483723 URI1O94763 535 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms