RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 EPHB4P54760 987 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 NFATC3Q12968 1075 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 CRIP3Q6Q6R5 217 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 PALM2Q8IXS6 379 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 CCDC191Q8NCU4 936 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 PIP4K2CQ8TBX8 421 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 CLIC6Q96NY7 704 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 WRNIP1Q96S55 665 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 PLEKHF1Q96S99 279 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 MPHOSPH8Q99549 860 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 ZNF747Q9BV97 191 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 ANKRD2Q9GZV1 360 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 GREM2Q9H772 168 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 HYPKQ9NX55 129 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 CWC25Q9NXE8 425 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-217ENST00000483442 ZDHHC9Q9Y397 364 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 TELO2Q9Y4R8 837 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 LRRC37AA6NMS7 1700 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 COL1A1P02452 1464 aaPredicted RBP4.5□□□□□ -1.69
LRCH3-217ENST00000483442 A0A1W2PQU0 124 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 PATE3B3GLJ2 98 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 TNPO2O14787 897 aaKnown RBP4.5□□□□□ -1.69
LRCH3-217ENST00000483442 PLIN1O60240 522 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 KLHL18O94889 574 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 TACR2P21452 398 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 ACVRL1P37023 503 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 CACNB3P54284 484 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 PPP2R2AP63151 447 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 PPATQ06203 517 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 CHRNDQ07001 517 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 PPIL2Q13356 520 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 SLC10A6Q3KNW5 377 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 TRMT10BQ6PF06 316 aaKnown RBP4.5□□□□□ -1.69
LRCH3-217ENST00000483442 ZFPM1Q8IX07 1006 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 PPM1EQ8WY54 764 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 CCDC140Q96MF4 163 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 LBHD1Q9BQE6 289 aaPredicted RBP4.5□□□□□ -1.69
LRCH3-217ENST00000483442 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.5□□□□□ -1.69
LRCH3-217ENST00000483442 SMOC1Q9H4F8 434 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 EPB41L1Q9H4G0 881 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 CCSER2Q9H7U1 834 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 PRKAG3Q9UGI9 489 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 ZSWIM8A7E2V4 1837 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 LAMA3Q16787 3333 aa4.5□□□□□ -1.69
LRCH3-217ENST00000483442 FAM205AQ6ZU69 1335 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 MAPK8IP3Q9UPT6 1336 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 ELL2O00472 640 aaPredicted RBP4.49□□□□□ -1.69
LRCH3-217ENST00000483442 CHL1O00533 1208 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 SUV39H1O43463 412 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 DLX3O60479 287 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 DGKIO75912 1065 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 AMHP03971 560 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 COL6A2P12110 1019 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 IL1R1P14778 569 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 FOSL2P15408 326 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 TCF3P15923 654 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 FKBP1AP62942 108 aaKnown RBP4.49□□□□□ -1.69
LRCH3-217ENST00000483442 MOGSQ13724 837 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 SHHQ15465 462 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 SURF1Q15526 300 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 LRRC26Q2I0M4 334 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 MFSD14BQ5SR56 506 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 ARHGEF18Q6ZSZ5 1173 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 ZNF804AQ7Z570 1209 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 CIR1Q86X95 450 aaPredicted RBP4.49□□□□□ -1.69
LRCH3-217ENST00000483442 KLHL36Q8N4N3 616 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 DTX3Q8N9I9 347 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 Q8TCH9 128 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 KISS1RQ969F8 398 aaPredicted RBP4.49□□□□□ -1.69
LRCH3-217ENST00000483442 COA7Q96BR5 231 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 GNRHR2Q96P88 292 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 TMEM209Q96SK2 561 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 PARK7Q99497 189 aaKnown RBP4.49□□□□□ -1.69
LRCH3-217ENST00000483442 PNNQ9H307 717 aaKnown RBP4.49□□□□□ -1.69
LRCH3-217ENST00000483442 SLC6A20Q9NP91 592 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 BABAM1Q9NWV8 329 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 HSPBP1Q9NZL4 362 aa4.49□□□□□ -1.69
LRCH3-217ENST00000483442 DDX60Q8IY21 1712 aaKnown RBP4.49□□□□□ -1.69
LRCH3-217ENST00000483442 ZNF646O15015 1829 aaPredicted RBP4.49□□□□□ -1.69
LRCH3-217ENST00000483442 ADGRA2Q96PE1 1338 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 LAMB4A4D0S4 1761 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 NKRFO15226 690 aaKnown RBP eCLIP4.48□□□□□ -1.69
LRCH3-217ENST00000483442 CNOT4O95628 575 aaKnown RBP4.48□□□□□ -1.69
LRCH3-217ENST00000483442 SSBP05455 408 aaKnown RBP eCLIP4.48□□□□□ -1.69
LRCH3-217ENST00000483442 CKMP06732 381 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 NTRK3Q16288 839 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 SPDYAQ5MJ70 313 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 KCNT2Q6UVM3 1135 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 GADL1Q6ZQY3 521 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 GPR155Q7Z3F1 870 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 PLEKHH3Q7Z736 793 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 ANKRD13CQ8N6S4 541 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 CELF2-AS1Q8N7Q2 184 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 USP38Q8NB14 1042 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 IER2Q9BTL4 223 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 PCGF6Q9BYE7 350 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 ZNF341Q9BYN7 854 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 SENP6Q9GZR1 1112 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-217ENST00000483442 TTYH1Q9H313 450 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-217ENST00000483442 JADE2Q9NQC1 790 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms