RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 STK3Q13188 491 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 SNW1Q13573 536 aaKnown RBP8.21□□□□□ -1.1
CSDE1-206ENST00000483030 TOB2Q14106 344 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-206ENST00000483030 TFDP1Q14186 410 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 MXD4Q14582 209 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-206ENST00000483030 PUM1Q14671 1186 aaKnown RBP eCLIP8.21□□□□□ -1.1
CSDE1-206ENST00000483030 PCBP1Q15365 356 aaKnown RBP eCLIP8.21□□□□□ -1.1
CSDE1-206ENST00000483030 NCAPH2Q6IBW4 605 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 PPP4R3AQ6IN85 833 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 PARM1Q6UWI2 310 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 RUFY3Q7L099 469 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 GRASPQ7Z6J2 395 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-206ENST00000483030 NEK8Q86SG6 692 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 GPR65Q8IYL9 337 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 HACE1Q8IYU2 909 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 MAML2Q8IZL2 1156 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-206ENST00000483030 ASAP3Q8TDY4 903 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 FGF14Q92915 247 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 ZNF274Q96GC6 653 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-206ENST00000483030 SHDQ96IW2 340 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 MTRQ99707 1265 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 PARP2Q9UGN5 583 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 ADAM28Q9UKQ2 775 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 ZFP37Q9Y6Q3 630 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-206ENST00000483030 VPS13AQ96RL7 3174 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 A0A087WWV3 80 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 TBX3O15119 743 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 B4GALT5O43286 388 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 DTNBO60941 627 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 NPTXRO95502 500 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 GCFC2P16383 781 aaKnown RBP8.2□□□□□ -1.1
CSDE1-206ENST00000483030 ARL2P36404 184 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 MBTD1Q05BQ5 628 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 POU5F1BQ06416 359 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 GRIK3Q13003 919 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 CAPSQ13938 189 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 AMHR2Q16671 573 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 SLC44A4Q53GD3 710 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 RTP2Q5QGT7 225 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 FAM171A1Q5VUB5 890 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 CPLX2Q6PUV4 134 aaKnown RBP8.2□□□□□ -1.1
CSDE1-206ENST00000483030 PIK3AP1Q6ZUJ8 805 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 CENPQQ7L2Z9 268 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-206ENST00000483030 CEP57Q86XR8 500 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 FAM177A1Q8N128 213 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-206ENST00000483030 SUMF1Q8NBK3 374 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 PJA1Q8NG27 643 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 OXER1Q8TDS5 423 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 HASPINQ8TF76 798 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 FGF13Q92913 245 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 CLSTN3Q9BQT9 956 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 PAAF1Q9BRP4 392 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 PHF20Q9BVI0 1012 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 ZSWIM6Q9HCJ5 1215 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 GJB4Q9NTQ9 266 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 WDR70Q9NW82 654 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 SPATA6Q9NWH7 488 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-206ENST00000483030 DLL3Q9NYJ7 618 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 CDH7Q9ULB5 785 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 POLIQ9UNA4 740 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 MTF2Q9Y483 593 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-206ENST00000483030 CYP46A1Q9Y6A2 500 aa8.2□□□□□ -1.1
CSDE1-206ENST00000483030 DCHS1Q96JQ0 3298 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 A0A1B0GUA9 196 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 KANSL1LA0AUZ9 987 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 CASTOR2A6NHX0 329 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 FAM170BA6NMN3 283 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 CCL16O15467 120 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 ADAM12O43184 909 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 LAMTOR5O43504 91 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 KINO60870 393 aaKnown RBP8.19□□□□□ -1.1
CSDE1-206ENST00000483030 DGAT1O75907 488 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 BAG4O95429 457 aaKnown RBP8.19□□□□□ -1.1
CSDE1-206ENST00000483030 CENPBP07199 599 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-206ENST00000483030 HNRNPA1P09651 372 aaKnown RBP eCLIP8.19□□□□□ -1.1
CSDE1-206ENST00000483030 CD72P21854 359 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 GLRA2P23416 452 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 CREMQ03060 361 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 SPIRE1Q08AE8 756 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 TUSC3Q13454 348 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 HSP90AA2PQ14568 343 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-206ENST00000483030 UBXN2BQ14CS0 331 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 RSPO4Q2I0M5 234 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-206ENST00000483030 EARS2Q5JPH6 523 aaKnown RBP8.19□□□□□ -1.1
CSDE1-206ENST00000483030 PPM1LQ5SGD2 360 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 VARS2Q5ST30 1063 aaKnown RBP8.19□□□□□ -1.1
CSDE1-206ENST00000483030 LIN9Q5TKA1 542 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 SLC27A1Q6PCB7 646 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 MAEAQ7L5Y9 396 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 ITFG1Q8TB96 612 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 LNX1Q8TBB1 728 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-206ENST00000483030 HSD17B14Q9BPX1 270 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 EIF2AK1Q9BQI3 630 aaKnown RBP8.19□□□□□ -1.1
CSDE1-206ENST00000483030 TTPALQ9BTX7 342 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 BCO2Q9BYV7 579 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 ANKEF1Q9NU02 776 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 FBXW11Q9UKB1 542 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 FARP1Q9Y4F1 1045 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-206ENST00000483030 STK24Q9Y6E0 443 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 SF3B1O75533 1304 aaKnown RBP eCLIP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms