RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ADHFE1Q8IWW8 467 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 LARP4BQ92615 738 aaKnown RBP15.24■□□□□ 0.03
VARS-225ENST00000482996 EPSTI1Q96J88 318 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 ZNF396Q96N95 335 aaPredicted RBP15.24■□□□□ 0.03
VARS-225ENST00000482996 USP28Q96RU2 1077 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 TCHPQ9BT92 498 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 HERC2P3Q9BVR0 1158 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 CCDC94Q9BW85 323 aaPredicted RBP15.24■□□□□ 0.03
VARS-225ENST00000482996 TARS2Q9BW92 718 aaKnown RBP15.24■□□□□ 0.03
VARS-225ENST00000482996 VN1R3Q9BXE9 311 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 EMILIN2Q9BXX0 1053 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 MRPL17Q9NRX2 175 aaKnown RBP15.24■□□□□ 0.03
VARS-225ENST00000482996 BLOC1S4Q9NUP1 217 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 MARCH5Q9NX47 278 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 MORC2Q9Y6X9 1032 aaPredicted RBP15.24■□□□□ 0.03
VARS-225ENST00000482996 TBCAO75347 108 aaKnown RBP15.23■□□□□ 0.03
VARS-225ENST00000482996 MAPTP10636 758 aaKnown RBP15.23■□□□□ 0.03
VARS-225ENST00000482996 SCP2P22307 547 aa15.23■□□□□ 0.03
VARS-225ENST00000482996 YARSP54577 528 aaKnown RBP15.23■□□□□ 0.03
VARS-225ENST00000482996 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
VARS-225ENST00000482996 ZP2Q05996 745 aa15.23■□□□□ 0.03
VARS-225ENST00000482996 KCNC3Q14003 757 aa15.23■□□□□ 0.03
VARS-225ENST00000482996 STK38Q15208 465 aa15.23■□□□□ 0.03
VARS-225ENST00000482996 PTPN14Q15678 1187 aa15.23■□□□□ 0.03
VARS-225ENST00000482996 TPRNQ4KMQ1 711 aa15.23■□□□□ 0.03
VARS-225ENST00000482996 SPECC1Q5M775 1068 aa15.23■□□□□ 0.03
VARS-225ENST00000482996 KRI1Q8N9T8 703 aaKnown RBP15.23■□□□□ 0.03
VARS-225ENST00000482996 TMEM161BQ8NDZ6 487 aa15.23■□□□□ 0.03
VARS-225ENST00000482996 REEP2Q9BRK0 252 aa15.23■□□□□ 0.03
VARS-225ENST00000482996 CDT1Q9H211 546 aa15.23■□□□□ 0.03
VARS-225ENST00000482996 PARVGQ9HBI0 331 aa15.23■□□□□ 0.03
VARS-225ENST00000482996 TOPORSQ9NS56 1045 aaPredicted RBP15.23■□□□□ 0.03
VARS-225ENST00000482996 STK17AQ9UEE5 414 aa15.23■□□□□ 0.03
VARS-225ENST00000482996 USP15Q9Y4E8 981 aaPredicted RBP15.23■□□□□ 0.03
VARS-225ENST00000482996 HCFC2Q9Y5Z7 792 aa15.23■□□□□ 0.03
VARS-225ENST00000482996 TDRD15B5MCY1 1934 aaKnown RBP15.23■□□□□ 0.03
VARS-225ENST00000482996 PTGESO14684 152 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 TADA2AO75478 443 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 MCF2P10911 925 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 DDIT3P35638 169 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 GRM5P41594 1212 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 NASPP49321 788 aaPredicted RBP15.22■□□□□ 0.03
VARS-225ENST00000482996 GLUD2P49448 558 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 HSP90AA2PQ14568 343 aaPredicted RBP15.22■□□□□ 0.03
VARS-225ENST00000482996 RRAGBQ5VZM2 374 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 KIAA1841Q6NSI8 718 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 MPZL3Q6UWV2 235 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 USP49Q70CQ1 688 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 ZBTB33Q86T24 672 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 MYCT1Q8N699 235 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 LRRC15Q8TF66 581 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 CLIC6Q96NY7 704 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 ZHX3Q9H4I2 956 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 PTPRHQ9HD43 1115 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 DZANK1Q9NVP4 752 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 ADAM28Q9UKQ2 775 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 MYH11P35749 1972 aa15.22■□□□□ 0.03
VARS-225ENST00000482996 CASTOR2A6NHX0 329 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 C2CD2LO14523 706 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 TOM1L1O75674 476 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 HARSP12081 509 aaKnown RBP15.21■□□□□ 0.03
VARS-225ENST00000482996 PROZP22891 400 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 KLRC2P26717 231 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 ABCD1P33897 745 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 ZNF131P52739 623 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 NCKAP1LP55160 1127 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 USP41Q3LFD5 358 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 CES5AQ6NT32 575 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 FUT10Q6P4F1 479 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 SYCE2Q6PIF2 218 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 ZPBP2Q6X784 338 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 CCDC73Q6ZRK6 1079 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 HAUS6Q7Z4H7 955 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 BICD1Q96G01 975 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 CD320Q9NPF0 282 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 ANKFY1Q9P2R3 1169 aa15.21■□□□□ 0.03
VARS-225ENST00000482996 SF3B1O75533 1304 aaKnown RBP eCLIP15.2■□□□□ 0.02
VARS-225ENST00000482996 C19orf67A6NJJ6 358 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 SPDYE4A6NLX3 237 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 F8W810 466 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 K7ENM7 598 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 SPTLC2O15270 562 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 LILRB3O75022 631 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 BRD1O95696 1058 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 CNPP09543 421 aaKnown RBP15.2■□□□□ 0.02
VARS-225ENST00000482996 ZSCAN22P10073 491 aaPredicted RBP15.2■□□□□ 0.02
VARS-225ENST00000482996 MATR3P43243 847 aaKnown RBP eCLIP15.2■□□□□ 0.02
VARS-225ENST00000482996 OSTNP61366 133 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 DSG1Q02413 1049 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 NOLC1Q14978 699 aaKnown RBP eCLIP15.2■□□□□ 0.02
VARS-225ENST00000482996 FOXD4L5Q5VV16 416 aaPredicted RBP15.2■□□□□ 0.02
VARS-225ENST00000482996 SV2BQ7L1I2 683 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 TAS1R1Q7RTX1 841 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 GPR65Q8IYL9 337 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 RNF168Q8IYW5 571 aaPredicted RBP15.2■□□□□ 0.02
VARS-225ENST00000482996 CEP120Q8N960 986 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 LINC00301Q8NCQ3 95 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 FOXD4L4Q8WXT5 416 aaPredicted RBP15.2■□□□□ 0.02
VARS-225ENST00000482996 SUSD6Q92537 303 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 KCNN1Q92952 543 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms