RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 FIZ1Q96SL8 496 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 C7orf25Q9BPX7 421 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 CCDC94Q9BW85 323 aaPredicted RBP9.61□□□□□ -0.87
SNX4-205ENST00000482965 LMAN2LQ9H0V9 348 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 ST6GALNAC4Q9H4F1 302 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 NRDE2Q9H7Z3 1164 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 PTPRHQ9HD43 1115 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 ALG13Q9NP73 1137 aaKnown RBP9.61□□□□□ -0.87
SNX4-205ENST00000482965 SPG21Q9NZD8 308 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 LMCD1Q9NZU5 365 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 PLAGL2Q9UPG8 496 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 HPSEQ9Y251 543 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 GDAQ9Y2T3 454 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 PDCD11Q14690 1871 aaKnown RBP9.6□□□□□ -0.87
SNX4-205ENST00000482965 FAM237AA0A1B0GTK4 181 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 NT5C1B-RDH14C9J2C7 533 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 INPPL1O15357 1258 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 CLDN3O15551 220 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 FGF18O76093 207 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 PROZP22891 400 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 GRM5P41594 1212 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 NDUFA8P51970 172 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 YARSP54577 528 aaKnown RBP9.6□□□□□ -0.87
SNX4-205ENST00000482965 OSTNP61366 133 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 GRIK3Q13003 919 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 ALCAMQ13740 583 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 TIGD5Q53EQ6 642 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 CNNM4Q6P4Q7 775 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 UNC13DQ70J99 1090 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 ZNF280BQ86YH2 543 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 MAP4K3Q8IVH8 894 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 GRAMD1CQ8IYS0 662 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 SLC39A11Q8N1S5 342 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 CEP120Q8N960 986 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 SPPL3Q8TCT6 385 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 POF1BQ8WVV4 589 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 TMEM169Q96HH4 297 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 BLZF1Q9H2G9 400 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 GOLPH3LQ9H4A5 285 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 OLFML3Q9NRN5 406 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 MIOSQ9NXC5 875 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 EXOC7Q9UPT5 735 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 PCDHB13Q9Y5F0 798 aa9.6□□□□□ -0.87
SNX4-205ENST00000482965 BRWD1Q9NSI6 2320 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 ABLIM1O14639 778 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 B4GALT3O60512 393 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 NR1I2O75469 434 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 PPP1R37O75864 691 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 DDHD2O94830 711 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 PIGRP01833 764 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 GALTP07902 379 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 MYBP10242 640 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 CASP1P29466 404 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 OR1G1P47890 313 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 SLC11A1P49279 550 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 PLCB3Q01970 1234 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 KRT17Q04695 432 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 UBE3AQ05086 875 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 MCL1Q07820 350 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 CUL4BQ13620 913 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 SKIV2LQ15477 1246 aaKnown RBP9.59□□□□□ -0.87
SNX4-205ENST00000482965 FAM26FQ5R3K3 315 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 L1TD1Q5T7N2 865 aaKnown RBP9.59□□□□□ -0.87
SNX4-205ENST00000482965 STXBP4Q6ZWJ1 553 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 SYCP3Q8IZU3 236 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 PAGE5Q96GU1 130 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 CCDC34Q96HJ3 373 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 ACAP3Q96P50 834 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 ACCSQ96QU6 501 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 TMEM175Q9BSA9 504 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 TOPORSQ9NS56 1045 aaPredicted RBP9.59□□□□□ -0.87
SNX4-205ENST00000482965 DNAJB4Q9UDY4 337 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 PUF60Q9UHX1 559 aaKnown RBP9.59□□□□□ -0.87
SNX4-205ENST00000482965 FAN1Q9Y2M0 1017 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 CHD9Q3L8U1 2897 aa9.59□□□□□ -0.87
SNX4-205ENST00000482965 PVALEFA0A1B0GWK0 134 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 ANKRD63C9JTQ0 380 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 PTGESO14684 152 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 PRPF6O94906 941 aaKnown RBP9.58□□□□□ -0.88
SNX4-205ENST00000482965 ZNF202O95125 648 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 ALDH2P05091 517 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 THP07101 528 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 DNAJB1P25685 340 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 CASP5P51878 434 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 DSC1Q08554 894 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 KYAT1Q16773 422 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 SEZ6Q53EL9 994 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 GLRA4Q5JXX5 417 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 SLFN12LQ6IEE8 588 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 SLC39A4Q6P5W5 647 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 KRBA2Q6ZNG9 492 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 COLGALT2Q8IYK4 626 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 GSTCDQ8NEC7 633 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 MICAL1Q8TDZ2 1067 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 HPS3Q969F9 1004 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 IGSF21Q96ID5 467 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 MSTO1Q9BUK6 570 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 STRA6Q9BX79 667 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 FGFBP2Q9BYJ0 223 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 HAPLN2Q9GZV7 340 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms