RNA–Protein interactions for RNA: ENST00000482630.6

VEGFA-213, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-213ENST00000482630 RARS2Q5T160 578 aaKnown RBP27.72■■■□□ 2.03
VEGFA-213ENST00000482630 FUT10Q6P4F1 479 aa27.72■■■□□ 2.03
VEGFA-213ENST00000482630 TAS1R1Q7RTX1 841 aa27.72■■■□□ 2.03
VEGFA-213ENST00000482630 CALML4Q96GE6 196 aa27.72■■■□□ 2.03
VEGFA-213ENST00000482630 MRPL4Q9BYD3 311 aaKnown RBP27.72■■■□□ 2.03
VEGFA-213ENST00000482630 ADAM28Q9UKQ2 775 aa27.72■■■□□ 2.03
VEGFA-213ENST00000482630 GDAQ9Y2T3 454 aa27.72■■■□□ 2.03
VEGFA-213ENST00000482630 SPDYE4A6NLX3 237 aa27.71■■■□□ 2.03
VEGFA-213ENST00000482630 PRR33A8MZF0 331 aa27.71■■■□□ 2.03
VEGFA-213ENST00000482630 F8W810 466 aa27.71■■■□□ 2.03
VEGFA-213ENST00000482630 PLA2G4BP0C869 781 aa27.71■■■□□ 2.03
VEGFA-213ENST00000482630 CLCN4P51793 760 aa27.71■■■□□ 2.03
VEGFA-213ENST00000482630 SLC12A3P55017 1021 aa27.71■■■□□ 2.03
VEGFA-213ENST00000482630 DSG1Q02413 1049 aa27.71■■■□□ 2.03
VEGFA-213ENST00000482630 HSP90AA2PQ14568 343 aaPredicted RBP27.71■■■□□ 2.03
VEGFA-213ENST00000482630 FBXL18Q96ME1 805 aa27.71■■■□□ 2.03
VEGFA-213ENST00000482630 NR2E1Q9Y466 385 aa27.71■■■□□ 2.03
VEGFA-213ENST00000482630 PTGESO14684 152 aa27.7■■■□□ 2.02
VEGFA-213ENST00000482630 TADA2AO75478 443 aa27.7■■■□□ 2.02
VEGFA-213ENST00000482630 ADH1AP07327 375 aa27.7■■■□□ 2.02
VEGFA-213ENST00000482630 LONP1P36776 959 aaKnown RBP27.7■■■□□ 2.02
VEGFA-213ENST00000482630 SMTNP53814 917 aa27.7■■■□□ 2.02
VEGFA-213ENST00000482630 RAD51AP2Q09MP3 1159 aa27.7■■■□□ 2.02
VEGFA-213ENST00000482630 SF3A1Q15459 793 aaKnown RBP27.7■■■□□ 2.02
VEGFA-213ENST00000482630 KIAA0319Q5VV43 1072 aa27.7■■■□□ 2.02
VEGFA-213ENST00000482630 C12orf76Q8N812 135 aaPredicted RBP27.7■■■□□ 2.02
VEGFA-213ENST00000482630 ACO2Q99798 780 aaKnown RBP27.7■■■□□ 2.02
VEGFA-213ENST00000482630 SFXN1Q9H9B4 322 aa27.7■■■□□ 2.02
VEGFA-213ENST00000482630 CHST7Q9NS84 486 aa27.7■■■□□ 2.02
VEGFA-213ENST00000482630 PLS3P13797 630 aa27.69■■■□□ 2.02
VEGFA-213ENST00000482630 USP41Q3LFD5 358 aa27.69■■■□□ 2.02
VEGFA-213ENST00000482630 ZNF568Q3ZCX4 644 aa27.69■■■□□ 2.02
VEGFA-213ENST00000482630 ATAT1Q5SQI0 421 aa27.69■■■□□ 2.02
VEGFA-213ENST00000482630 SPIRE2Q8WWL2 714 aa27.69■■■□□ 2.02
VEGFA-213ENST00000482630 INTS4Q96HW7 963 aaKnown RBP27.69■■■□□ 2.02
VEGFA-213ENST00000482630 NTPCRQ9BSD7 190 aaKnown RBP27.69■■■□□ 2.02
VEGFA-213ENST00000482630 RXFP1Q9HBX9 757 aa27.69■■■□□ 2.02
VEGFA-213ENST00000482630 DPP7Q9UHL4 492 aa27.69■■■□□ 2.02
VEGFA-213ENST00000482630 SF3B1O75533 1304 aaKnown RBP eCLIP27.68■■■□□ 2.026e-7■■■■■ 31.1
VEGFA-213ENST00000482630 CASTOR2A6NHX0 329 aa27.68■■■□□ 2.02
VEGFA-213ENST00000482630 SFI1A8K8P3 1242 aa27.68■■■□□ 2.02
VEGFA-213ENST00000482630 SLC16A4O15374 487 aa27.68■■■□□ 2.02
VEGFA-213ENST00000482630 ELMSAN1Q6PJG2 1045 aa27.68■■■□□ 2.02
VEGFA-213ENST00000482630 TAS1R3Q7RTX0 852 aa27.68■■■□□ 2.02
VEGFA-213ENST00000482630 GPR65Q8IYL9 337 aa27.68■■■□□ 2.02
VEGFA-213ENST00000482630 RABGGTAQ92696 567 aa27.68■■■□□ 2.02
VEGFA-213ENST00000482630 GPR62Q9BZJ7 368 aa27.68■■■□□ 2.02
VEGFA-213ENST00000482630 POMKQ9H5K3 350 aa27.68■■■□□ 2.02
VEGFA-213ENST00000482630 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.68■■■□□ 2.02
VEGFA-213ENST00000482630 CDH22Q9UJ99 828 aa27.68■■■□□ 2.02
VEGFA-213ENST00000482630 TEX28O15482 410 aa27.67■■■□□ 2.02
VEGFA-213ENST00000482630 YARSP54577 528 aaKnown RBP27.67■■■□□ 2.02
VEGFA-213ENST00000482630 CREMQ03060 361 aa27.67■■■□□ 2.02
VEGFA-213ENST00000482630 STRN3Q13033 797 aa27.67■■■□□ 2.02
VEGFA-213ENST00000482630 RASSF8Q8NHQ8 419 aa27.67■■■□□ 2.02
VEGFA-213ENST00000482630 PAAF1Q9BRP4 392 aa27.67■■■□□ 2.02
VEGFA-213ENST00000482630 CCDC94Q9BW85 323 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-213ENST00000482630 TARS2Q9BW92 718 aaKnown RBP27.67■■■□□ 2.02
VEGFA-213ENST00000482630 CDT1Q9H211 546 aa27.67■■■□□ 2.02
VEGFA-213ENST00000482630 TSHZ2Q9NRE2 1034 aa27.67■■■□□ 2.02
VEGFA-213ENST00000482630 TOPORSQ9NS56 1045 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-213ENST00000482630 CACNG4Q9UBN1 327 aa27.67■■■□□ 2.02
VEGFA-213ENST00000482630 RAPGEFL1Q9UHV5 662 aa27.67■■■□□ 2.02
VEGFA-213ENST00000482630 HCN4Q9Y3Q4 1203 aa27.67■■■□□ 2.02
VEGFA-213ENST00000482630 SYT1P21579 422 aa27.66■■■□□ 2.02
VEGFA-213ENST00000482630 GRM5P41594 1212 aa27.66■■■□□ 2.02
VEGFA-213ENST00000482630 NAB2Q15742 525 aa27.66■■■□□ 2.02
VEGFA-213ENST00000482630 TMC5Q6UXY8 1006 aa27.66■■■□□ 2.02
VEGFA-213ENST00000482630 EDAQ92838 391 aa27.66■■■□□ 2.02
VEGFA-213ENST00000482630 TCHPQ9BT92 498 aa27.66■■■□□ 2.02
VEGFA-213ENST00000482630 PTPRHQ9HD43 1115 aa27.66■■■□□ 2.02
VEGFA-213ENST00000482630 LARSQ9P2J5 1176 aaKnown RBP27.66■■■□□ 2.02
VEGFA-213ENST00000482630 H0YCG3 227 aa27.65■■■□□ 2.02
VEGFA-213ENST00000482630 K7ELQ4 463 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-213ENST00000482630 GLUD1P00367 558 aa27.65■■■□□ 2.02
VEGFA-213ENST00000482630 WEE2P0C1S8 567 aa27.65■■■□□ 2.02
VEGFA-213ENST00000482630 SP100P23497 879 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-213ENST00000482630 KANK3Q6NY19 840 aa27.65■■■□□ 2.02
VEGFA-213ENST00000482630 MPZL3Q6UWV2 235 aa27.65■■■□□ 2.02
VEGFA-213ENST00000482630 TMEM161BQ8NDZ6 487 aa27.65■■■□□ 2.02
VEGFA-213ENST00000482630 RIN2Q8WYP3 895 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-213ENST00000482630 B3GALT6Q96L58 329 aa27.65■■■□□ 2.02
VEGFA-213ENST00000482630 CXCL16Q9H2A7 254 aa27.65■■■□□ 2.02
VEGFA-213ENST00000482630 MAN1C1Q9NR34 630 aa27.65■■■□□ 2.02
VEGFA-213ENST00000482630 FNIP2Q9P278 1114 aa27.65■■■□□ 2.02
VEGFA-213ENST00000482630 ODF2LQ9ULJ1 636 aa27.65■■■□□ 2.02
VEGFA-213ENST00000482630 KIF4AO95239 1232 aa27.64■■■□□ 2.02
VEGFA-213ENST00000482630 C1RP00736 705 aa27.64■■■□□ 2.02
VEGFA-213ENST00000482630 MCF2P10911 925 aa27.64■■■□□ 2.02
VEGFA-213ENST00000482630 PROZP22891 400 aa27.64■■■□□ 2.02
VEGFA-213ENST00000482630 GRIN1Q05586 938 aa27.64■■■□□ 2.02
VEGFA-213ENST00000482630 ELAVL2Q12926 359 aaKnown RBP27.64■■■□□ 2.02
VEGFA-213ENST00000482630 ARSHQ5FYA8 562 aa27.64■■■□□ 2.02
VEGFA-213ENST00000482630 GPR149Q86SP6 731 aa27.64■■■□□ 2.02
VEGFA-213ENST00000482630 ZBTB33Q86T24 672 aa27.64■■■□□ 2.02
VEGFA-213ENST00000482630 GPBP1Q86WP2 473 aa27.64■■■□□ 2.02
VEGFA-213ENST00000482630 HASPINQ8TF76 798 aa27.64■■■□□ 2.02
VEGFA-213ENST00000482630 PPP1R10Q96QC0 940 aaKnown RBP27.64■■■□□ 2.02
VEGFA-213ENST00000482630 NPHP3-ACAD11A0A0J9YXS1 232 aa27.63■■■□□ 2.01
VEGFA-213ENST00000482630 MAPTP10636 758 aaKnown RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms