RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 CTSHP09668 335 aa13.59□□□□□ -0.23
IFT88-206ENST00000482172 FGFR4P22455 802 aa13.59□□□□□ -0.23
IFT88-206ENST00000482172 ACOT2P49753 483 aa13.59□□□□□ -0.23
IFT88-206ENST00000482172 DCAF17Q5H9S7 520 aaPredicted RBP13.59□□□□□ -0.23
IFT88-206ENST00000482172 TCERG1LQ5VWI1 586 aa13.59□□□□□ -0.23
IFT88-206ENST00000482172 SPECC1LQ69YQ0 1117 aa13.59□□□□□ -0.23
IFT88-206ENST00000482172 TRAF7Q6Q0C0 670 aa13.59□□□□□ -0.23
IFT88-206ENST00000482172 BRSK2Q8IWQ3 736 aa13.59□□□□□ -0.23
IFT88-206ENST00000482172 IQCDQ96DY2 449 aa13.59□□□□□ -0.23
IFT88-206ENST00000482172 C11orf49Q9H6J7 331 aa13.59□□□□□ -0.23
IFT88-206ENST00000482172 ERVK-5Q9HDB9 667 aa13.59□□□□□ -0.23
IFT88-206ENST00000482172 ST3GAL5Q9UNP4 418 aa13.59□□□□□ -0.23
IFT88-206ENST00000482172 GOLGA6L6A8MZA4 724 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 PES1O00541 588 aaKnown RBP13.58□□□□□ -0.24
IFT88-206ENST00000482172 IL18RAPO95256 599 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 PARNO95453 639 aaKnown RBP13.58□□□□□ -0.24
IFT88-206ENST00000482172 SELPP16109 830 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 DEKP35659 375 aaKnown RBP13.58□□□□□ -0.24
IFT88-206ENST00000482172 GRM5P41594 1212 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 FMO5P49326 533 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 AP3M2P53677 418 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 C1orf220Q5T0J3 134 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 NECAB2Q7Z6G3 386 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 CD302Q8IX05 232 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 DRC7Q8IY82 874 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 THNSL1Q8IYQ7 743 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 FNBP1Q96RU3 617 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 NUP58Q9BVL2 599 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 TRAIPQ9BWF2 469 aa13.58□□□□□ -0.24
IFT88-206ENST00000482172 RBAKQ9NYW8 714 aaPredicted RBP13.58□□□□□ -0.24
IFT88-206ENST00000482172 PIN4Q9Y237 131 aaKnown RBP13.58□□□□□ -0.24
IFT88-206ENST00000482172 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.58□□□□□ -0.24
IFT88-206ENST00000482172 LRRIQ3A6PVS8 624 aaPredicted RBP13.57□□□□□ -0.24
IFT88-206ENST00000482172 PQBP1O60828 265 aaKnown RBP13.57□□□□□ -0.24
IFT88-206ENST00000482172 STAG3L1P0CL83 205 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 HARSP12081 509 aaKnown RBP13.57□□□□□ -0.24
IFT88-206ENST00000482172 ATN1P54259 1190 aaPredicted RBP13.57□□□□□ -0.24
IFT88-206ENST00000482172 DLG4P78352 724 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 CETN1Q12798 172 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 PAK2Q13177 524 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 TRIM14Q14142 442 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 LPIN1Q14693 890 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 FIGNQ5HY92 759 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 ZBTB41Q5SVQ8 909 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 LRRC8DQ7L1W4 858 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 TMC6Q7Z403 805 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 CDR2LQ86X02 465 aaPredicted RBP13.57□□□□□ -0.24
IFT88-206ENST00000482172 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
IFT88-206ENST00000482172 PLEKHO2Q8TD55 490 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 DIS3LQ8TF46 1054 aaKnown RBP13.57□□□□□ -0.24
IFT88-206ENST00000482172 PAWRQ96IZ0 340 aaKnown RBP13.57□□□□□ -0.24
IFT88-206ENST00000482172 ACAP3Q96P50 834 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 TSPAN18Q96SJ8 248 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 CCDC94Q9BW85 323 aaPredicted RBP13.57□□□□□ -0.24
IFT88-206ENST00000482172 ASB7Q9H672 318 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 AGO3Q9H9G7 860 aaKnown RBP13.57□□□□□ -0.24
IFT88-206ENST00000482172 RPF1Q9H9Y2 349 aaKnown RBP13.57□□□□□ -0.24
IFT88-206ENST00000482172 PADI3Q9ULW8 664 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 SIK3Q9Y2K2 1263 aa13.57□□□□□ -0.24
IFT88-206ENST00000482172 NPTXRO95502 500 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 TRIM49P0CI25 452 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 TRIM49CP0CI26 452 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 GHRP10912 638 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 ZSCAN20P17040 1043 aaPredicted RBP13.56□□□□□ -0.24
IFT88-206ENST00000482172 TNFSF9P41273 254 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 TLE2Q04725 743 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 PPP3CAQ08209 521 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 FAAP100Q0VG06 881 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 KCNMA1Q12791 1236 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 NFX1Q12986 1120 aaKnown RBP13.56□□□□□ -0.24
IFT88-206ENST00000482172 TBX2Q13207 712 aaPredicted RBP13.56□□□□□ -0.24
IFT88-206ENST00000482172 DSC3Q14574 896 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 SYCP1Q15431 976 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 ENOX2Q16206 610 aaKnown RBP13.56□□□□□ -0.24
IFT88-206ENST00000482172 TRIM60Q495X7 471 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 UBXN11Q5T124 520 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 KRT39Q6A163 491 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 GBP6Q6ZN66 633 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 NT5DC4Q86YG4 428 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 WDR49Q8IV35 697 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 CCDC127Q96BQ5 260 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 CGRRF1Q99675 332 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 TRIM6Q9C030 488 aaPredicted RBP13.56□□□□□ -0.24
IFT88-206ENST00000482172 PLEKHA5Q9HAU0 1116 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 TMEM8AQ9HCN3 771 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 COQ4Q9Y3A0 265 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 DAAM1Q9Y4D1 1078 aa13.56□□□□□ -0.24
IFT88-206ENST00000482172 CD52P31358 61 aa13.55□□□□□ -0.24
IFT88-206ENST00000482172 MXI1P50539 228 aa13.55□□□□□ -0.24
IFT88-206ENST00000482172 RAB27AP51159 221 aa13.55□□□□□ -0.24
IFT88-206ENST00000482172 GSDMDP57764 484 aa13.55□□□□□ -0.24
IFT88-206ENST00000482172 MYL7Q01449 175 aa13.55□□□□□ -0.24
IFT88-206ENST00000482172 EXOC3L4Q17RC7 722 aa13.55□□□□□ -0.24
IFT88-206ENST00000482172 SEZ6Q53EL9 994 aa13.55□□□□□ -0.24
IFT88-206ENST00000482172 TWF2Q6IBS0 349 aaKnown RBP13.55□□□□□ -0.24
IFT88-206ENST00000482172 C15orf39Q6ZRI6 1047 aa13.55□□□□□ -0.24
IFT88-206ENST00000482172 CEP120Q8N960 986 aa13.55□□□□□ -0.24
IFT88-206ENST00000482172 SPC24Q8NBT2 197 aa13.55□□□□□ -0.24
IFT88-206ENST00000482172 EIF2AQ9BY44 585 aaKnown RBP13.55□□□□□ -0.24
IFT88-206ENST00000482172 EDEM3Q9BZQ6 932 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms