RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 OTUD6AQ7L8S5 288 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 C12orf50Q8NA57 414 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-218ENST00000482056 TMEM161BQ8NDZ6 487 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 ZSWIM2Q8NEG5 633 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 PARD3BQ8TEW8 1205 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 KAT2BQ92831 832 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 TATDN2Q93075 761 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 CHMP6Q96FZ7 201 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 SEC16BQ96JE7 1060 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 XPO6Q96QU8 1125 aaKnown RBP16.47■□□□□ 0.23
C9orf3-218ENST00000482056 CEP89Q96ST8 783 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 TMEM109Q9BVC6 243 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 EPB41L4BQ9H329 900 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 C17orf75Q9HAS0 396 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 RAVER2Q9HCJ3 691 aaKnown RBP16.47■□□□□ 0.23
C9orf3-218ENST00000482056 GPRC5CQ9NQ84 441 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 KMT5AQ9NQR1 393 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 TLDC2A0PJX2 215 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 DKC1O60832 514 aaKnown RBP eCLIP16.47■□□□□ 0.23
C9orf3-218ENST00000482056 MYCLP12524 364 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-218ENST00000482056 RARGP13631 454 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 CNGA1P29973 690 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 MAN1A1P33908 653 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 MAP3K10Q02779 954 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 ENPEPQ07075 957 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 SLC29A2Q14542 456 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 PPP1R7Q15435 360 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 UGCGQ16739 394 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 ERMARDQ5T6L9 678 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 TTC27Q6P3X3 843 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 AGBL3Q8NEM8 1001 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 SPIRE2Q8WWL2 714 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 SEMA4DQ92854 862 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 RNF25Q96BH1 459 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-218ENST00000482056 SAAL1Q96ER3 474 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 SELENOSQ9BQE4 189 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 SLC38A10Q9HBR0 1119 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 HOMER2Q9NSB8 354 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 RAB20Q9NX57 234 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 RGPD3A6NKT7 1758 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-218ENST00000482056 RGPD4Q7Z3J3 1758 aa16.47■□□□□ 0.23
C9orf3-218ENST00000482056 DENND3A2RUS2 1198 aa16.46■□□□□ 0.23
C9orf3-218ENST00000482056 ANKRD63C9JTQ0 380 aa16.46■□□□□ 0.23
C9orf3-218ENST00000482056 SHBGP04278 402 aa16.46■□□□□ 0.23
C9orf3-218ENST00000482056 NPTX2P47972 431 aa16.46■□□□□ 0.23
C9orf3-218ENST00000482056 SPP2Q13103 211 aa16.46■□□□□ 0.23
C9orf3-218ENST00000482056 FBXW10Q5XX13 1052 aa16.46■□□□□ 0.23
C9orf3-218ENST00000482056 XRRA1Q6P2D8 792 aa16.46■□□□□ 0.23
C9orf3-218ENST00000482056 HELQQ8TDG4 1101 aa16.46■□□□□ 0.23
C9orf3-218ENST00000482056 ART4Q93070 314 aa16.46■□□□□ 0.23
C9orf3-218ENST00000482056 TRIM11Q96F44 468 aa16.46■□□□□ 0.23
C9orf3-218ENST00000482056 MFSD14AQ96MC6 490 aa16.46■□□□□ 0.23
C9orf3-218ENST00000482056 TAAR1Q96RJ0 339 aa16.46■□□□□ 0.23
C9orf3-218ENST00000482056 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.46■□□□□ 0.23
C9orf3-218ENST00000482056 VGLL3A8MV65 326 aa16.46■□□□□ 0.22
C9orf3-218ENST00000482056 CTNND1O60716 968 aaKnown RBP16.46■□□□□ 0.22
C9orf3-218ENST00000482056 ZBED4O75132 1171 aa16.46■□□□□ 0.22
C9orf3-218ENST00000482056 ZC3H11AO75152 810 aaKnown RBP eCLIP16.46■□□□□ 0.22
C9orf3-218ENST00000482056 HNRNPH1P31943 449 aaKnown RBP16.46■□□□□ 0.22
C9orf3-218ENST00000482056 ABCD1P33897 745 aa16.46■□□□□ 0.22
C9orf3-218ENST00000482056 MMP13P45452 471 aa16.46■□□□□ 0.22
C9orf3-218ENST00000482056 KCTD19Q17RG1 926 aaPredicted RBP16.46■□□□□ 0.22
C9orf3-218ENST00000482056 ARHGEF16Q5VV41 709 aa16.46■□□□□ 0.22
C9orf3-218ENST00000482056 TRMT10CQ7L0Y3 403 aaKnown RBP16.46■□□□□ 0.22
C9orf3-218ENST00000482056 TAOK1Q7L7X3 1001 aa16.46■□□□□ 0.22
C9orf3-218ENST00000482056 POMGNT1Q8WZA1 660 aa16.46■□□□□ 0.22
C9orf3-218ENST00000482056 RMDN3Q96TC7 470 aa16.46■□□□□ 0.22
C9orf3-218ENST00000482056 SH2D3AQ9BRG2 576 aa16.46■□□□□ 0.22
C9orf3-218ENST00000482056 AZI2Q9H6S1 392 aa16.46■□□□□ 0.22
C9orf3-218ENST00000482056 LRRC19Q9H756 370 aa16.46■□□□□ 0.22
C9orf3-218ENST00000482056 GINM1Q9NU53 330 aa16.46■□□□□ 0.22
C9orf3-218ENST00000482056 CHORDC1Q9UHD1 332 aaPredicted RBP16.46■□□□□ 0.22
C9orf3-218ENST00000482056 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.22
C9orf3-218ENST00000482056 TMEM150BA6NC51 233 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 MYBL1P10243 752 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 RARAP10276 462 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 KRT5P13647 590 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 ADSSP30520 456 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 RPS6P62753 249 aaKnown RBP16.45■□□□□ 0.22
C9orf3-218ENST00000482056 CLEC16AQ2KHT3 1053 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 PLA2G4FQ68DD2 849 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 SYDE1Q6ZW31 735 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-218ENST00000482056 CDAN1Q8IWY9 1227 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 SLCO2A1Q92959 643 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 ROPN1BQ9BZX4 212 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-218ENST00000482056 KIAA1683Q9H0B3 1180 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 SEMA4AQ9H3S1 761 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 ROPN1Q9HAT0 212 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-218ENST00000482056 PXMP2Q9NR77 195 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 WHRNQ9P202 907 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 PTPN22Q9Y2R2 807 aa16.45■□□□□ 0.22
C9orf3-218ENST00000482056 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.45■□□□□ 0.22
C9orf3-218ENST00000482056 TESPA1A2RU30 521 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-218ENST00000482056 H0YCG3 227 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 RIPK2O43353 540 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 FDX1P10109 184 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 CHN1P15882 459 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 DRD4P21917 467 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 MAPK4P31152 587 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 GTF2A1P52655 376 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms