RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 DMGDHQ9UI17 866 aaKnown RBP15.6■□□□□ 0.09
CHD3-211ENST00000481999 GOLGA6BA6NDN3 693 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 K7ERI5 159 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 TGFB3P10600 412 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 GGCXP38435 758 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 SPOPLQ6IQ16 392 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 GPRC5AQ8NFJ5 357 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 HDAC7Q8WUI4 952 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 C17orf75Q9HAS0 396 aa15.6■□□□□ 0.09
CHD3-211ENST00000481999 MKI67P46013 3256 aaKnown RBP15.59■□□□□ 0.09
CHD3-211ENST00000481999 TNFSF9P41273 254 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 ADCYAP1R1P41586 468 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 NOP2P46087 812 aaKnown RBP15.59■□□□□ 0.09
CHD3-211ENST00000481999 BRDTQ58F21 947 aaPredicted RBP15.59■□□□□ 0.09
CHD3-211ENST00000481999 CRELD2Q6UXH1 353 aaPredicted RBP15.59■□□□□ 0.09
CHD3-211ENST00000481999 ZBTB33Q86T24 672 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 SLC47A2Q86VL8 602 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 GPD1LQ8N335 351 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 FBXL18Q96ME1 805 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 TULP2O00295 520 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 CYP26A1O43174 497 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 SGPL1O95470 568 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 ZNF286BP0CG31 522 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 TNFRSF8P28908 595 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 CLCN3P51790 818 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 C8orf74Q6P047 294 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 EMBQ6PCB8 327 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 SYT11Q9BT88 431 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 MROH8Q9H579 483 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 GBA2Q9HCG7 927 aaPredicted RBP15.59■□□□□ 0.09
CHD3-211ENST00000481999 TRPC6Q9Y210 931 aa15.59■□□□□ 0.09
CHD3-211ENST00000481999 FERP16591 822 aa15.58■□□□□ 0.09
CHD3-211ENST00000481999 EPHB4P54760 987 aa15.58■□□□□ 0.09
CHD3-211ENST00000481999 GALCP54803 685 aa15.58■□□□□ 0.09
CHD3-211ENST00000481999 IRX5P78411 483 aaPredicted RBP15.58■□□□□ 0.09
CHD3-211ENST00000481999 STRN3Q13033 797 aa15.58■□□□□ 0.09
CHD3-211ENST00000481999 PLCB4Q15147 1175 aa15.58■□□□□ 0.09
CHD3-211ENST00000481999 SND1Q7KZF4 910 aaKnown RBP eCLIP15.58■□□□□ 0.09
CHD3-211ENST00000481999 RHPN2Q8IUC4 686 aa15.58■□□□□ 0.09
CHD3-211ENST00000481999 METTL13Q8N6R0 699 aa15.58■□□□□ 0.09
CHD3-211ENST00000481999 RNF149Q8NC42 400 aa15.58■□□□□ 0.09
CHD3-211ENST00000481999 SLC30A5Q8TAD4 765 aa15.58■□□□□ 0.09
CHD3-211ENST00000481999 NENFQ9UMX5 172 aa15.58■□□□□ 0.09
CHD3-211ENST00000481999 PCDHGC5Q9Y5F6 944 aa15.58■□□□□ 0.09
CHD3-211ENST00000481999 AGPSO00116 658 aa15.58■□□□□ 0.08
CHD3-211ENST00000481999 NAMPTP43490 491 aa15.58■□□□□ 0.08
CHD3-211ENST00000481999 RTP1P59025 263 aa15.58■□□□□ 0.08
CHD3-211ENST00000481999 CST9Q5W186 159 aa15.58■□□□□ 0.08
CHD3-211ENST00000481999 KRT39Q6A163 491 aa15.58■□□□□ 0.08
CHD3-211ENST00000481999 ARHGEF26Q96DR7 871 aa15.58■□□□□ 0.08
CHD3-211ENST00000481999 MFSD14AQ96MC6 490 aa15.58■□□□□ 0.08
CHD3-211ENST00000481999 NLRP4Q96MN2 994 aa15.58■□□□□ 0.08
CHD3-211ENST00000481999 AGO2Q9UKV8 859 aaKnown RBP15.58■□□□□ 0.08
CHD3-211ENST00000481999 ADCY6O43306 1168 aa15.57■□□□□ 0.08
CHD3-211ENST00000481999 ATMINO43313 823 aaPredicted RBP15.57■□□□□ 0.08
CHD3-211ENST00000481999 MAFO75444 373 aaPredicted RBP15.57■□□□□ 0.08
CHD3-211ENST00000481999 SSTR3P32745 418 aaPredicted RBP15.57■□□□□ 0.08
CHD3-211ENST00000481999 C10orf76Q5T2E6 689 aa15.57■□□□□ 0.08
CHD3-211ENST00000481999 FAM160B1Q5W0V3 765 aa15.57■□□□□ 0.08
CHD3-211ENST00000481999 TMEM174Q8WUU8 243 aa15.57■□□□□ 0.08
CHD3-211ENST00000481999 THAP2Q9H0W7 228 aa15.57■□□□□ 0.08
CHD3-211ENST00000481999 NRBP2Q9NSY0 501 aa15.57■□□□□ 0.08
CHD3-211ENST00000481999 RBM12Q9NTZ6 932 aaKnown RBP15.57■□□□□ 0.08
CHD3-211ENST00000481999 BZW2Q9Y6E2 419 aaKnown RBP15.57■□□□□ 0.08
CHD3-211ENST00000481999 B4GALT5O43286 388 aa15.57■□□□□ 0.08
CHD3-211ENST00000481999 TNNI1P19237 187 aa15.57■□□□□ 0.08
CHD3-211ENST00000481999 OSTNP61366 133 aa15.57■□□□□ 0.08
CHD3-211ENST00000481999 PRPF4BQ13523 1007 aaKnown RBP15.57■□□□□ 0.08
CHD3-211ENST00000481999 TAPT1Q6NXT6 567 aa15.57■□□□□ 0.08
CHD3-211ENST00000481999 MAMDC4Q6UXC1 1216 aa15.57■□□□□ 0.08
CHD3-211ENST00000481999 NOP9Q86U38 636 aaKnown RBP15.57■□□□□ 0.08
CHD3-211ENST00000481999 SLC17A8Q8NDX2 589 aa15.57■□□□□ 0.08
CHD3-211ENST00000481999 HELQQ8TDG4 1101 aa15.57■□□□□ 0.08
CHD3-211ENST00000481999 RIN2Q8WYP3 895 aaPredicted RBP15.57■□□□□ 0.08
CHD3-211ENST00000481999 PLXNA1Q9UIW2 1896 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 IQCF3P0C7M6 154 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 CETPP11597 493 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 SLC7A5Q01650 507 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 LAMTOR4Q0VGL1 99 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 CETN1Q12798 172 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 CEP120Q8N960 986 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 FBXL13Q8NEE6 735 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 OR5B17Q8NGF7 314 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 CAVIN3Q969G5 261 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 LENG1Q96BZ8 264 aaPredicted RBP15.56■□□□□ 0.08
CHD3-211ENST00000481999 HVCN1Q96D96 273 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 PCDHB18PQ96TA0 734 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 MSTO1Q9BUK6 570 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 MINDY3Q9H8M7 445 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 TMEM8AQ9HCN3 771 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 RAB20Q9NX57 234 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 PLXNB2O15031 1838 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 ZNF233A6NK53 670 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 BTNL10A8MVZ5 291 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 CLSTN1O94985 981 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 ARHGAP1Q07960 439 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 ZNF792Q3KQV3 632 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 MEI1Q5TIA1 1274 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 TDRD10Q5VZ19 366 aaKnown RBP15.56■□□□□ 0.08
CHD3-211ENST00000481999 IFT20Q8IY31 132 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms