RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 IFT74Q96LB3 600 aa18.11■□□□□ 0.49
SH3D21-203ENST00000480549 SH3GL3Q99963 347 aa18.11■□□□□ 0.49
SH3D21-203ENST00000480549 DDX20Q9UHI6 824 aaKnown RBP18.11■□□□□ 0.49
SH3D21-203ENST00000480549 HYOU1Q9Y4L1 999 aa18.11■□□□□ 0.49
SH3D21-203ENST00000480549 NDUFAB1O14561 156 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 TGFB3P10600 412 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 FASTKD5Q7L8L6 764 aaKnown RBP18.1■□□□□ 0.49
SH3D21-203ENST00000480549 ZNF572Q7Z3I7 529 aaPredicted RBP18.1■□□□□ 0.49
SH3D21-203ENST00000480549 PARD3BQ8TEW8 1205 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 KCNN1Q92952 543 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 RPGRIP1Q96KN7 1286 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 TAF1DQ9H5J8 278 aaPredicted RBP18.1■□□□□ 0.49
SH3D21-203ENST00000480549 GLTPD2A6NH11 291 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 ARIH2O95376 493 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 AARSP49588 968 aaKnown RBP eCLIP18.1■□□□□ 0.498e-6■■■■■ 52.4
SH3D21-203ENST00000480549 NAP1L1P55209 391 aaKnown RBP18.1■□□□□ 0.49
SH3D21-203ENST00000480549 BRDTQ58F21 947 aaPredicted RBP18.1■□□□□ 0.49
SH3D21-203ENST00000480549 EEPD1Q7L9B9 569 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 TMEM143Q96AN5 459 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 MFSD14AQ96MC6 490 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 PORCNQ9H237 461 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 MXI1P50539 228 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 TARBP2Q15633 366 aaKnown RBP18.1■□□□□ 0.49
SH3D21-203ENST00000480549 ARHGAP44Q17R89 818 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 ZC3H12AQ5D1E8 599 aaKnown RBP18.1■□□□□ 0.49
SH3D21-203ENST00000480549 WLSQ5T9L3 541 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 ARMC3Q5W041 872 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 ARMC9Q7Z3E5 817 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 VPS36Q86VN1 386 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 ASAP3Q8TDY4 903 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 SCLT1Q96NL6 688 aa18.1■□□□□ 0.49
SH3D21-203ENST00000480549 GRID2IPA4D2P6 1211 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 ANKRD33BA6NCL7 494 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 FOXN3O00409 490 aaPredicted RBP18.09■□□□□ 0.49
SH3D21-203ENST00000480549 EIF3HO15372 352 aaKnown RBP eCLIP18.09■□□□□ 0.49
SH3D21-203ENST00000480549 FSBPO95073 299 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 TCP1P17987 556 aaKnown RBP18.09■□□□□ 0.49
SH3D21-203ENST00000480549 OSBPP22059 807 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 COPB2P35606 906 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 ARL2P36404 184 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 CETN1Q12798 172 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 KIF22Q14807 665 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 LY6KQ17RY6 165 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 POMGNT1Q8WZA1 660 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 ZBTB10Q96DT7 871 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 HNRNPDLO14979 420 aaKnown RBP18.09■□□□□ 0.49
SH3D21-203ENST00000480549 GGPS1O95749 300 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 GARTP22102 1010 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 GLRA2P23416 452 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 GBP2P32456 591 aaPredicted RBP18.09■□□□□ 0.49
SH3D21-203ENST00000480549 CDR1P51861 262 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 SNX1Q13596 522 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 EAPPQ56P03 285 aaPredicted RBP18.09■□□□□ 0.49
SH3D21-203ENST00000480549 METTL7BQ6UX53 244 aa18.09■□□□□ 0.49
SH3D21-203ENST00000480549 UBE2TQ9NPD8 197 aaPredicted RBP18.09■□□□□ 0.49
SH3D21-203ENST00000480549 TMCO5BA8MYB1 307 aa18.08■□□□□ 0.49
SH3D21-203ENST00000480549 H0YCG3 227 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 CXCR5P32302 372 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 CYP24A1Q07973 514 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 PPFIA1Q13136 1202 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 MEI1Q5TIA1 1274 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 GLYCTKQ8IVS8 523 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 CCDC26Q8TAB7 109 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 CAGE1Q8TC20 777 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 TMC2Q8TDI7 906 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 SEMA4DQ92854 862 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 CCDC127Q96BQ5 260 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 PSMB7Q99436 277 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 POP1Q99575 1024 aaKnown RBP18.08■□□□□ 0.48
SH3D21-203ENST00000480549 TSKSQ9UJT2 592 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 INTUQ9ULD6 942 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 COQ4Q9Y3A0 265 aa18.08■□□□□ 0.48
SH3D21-203ENST00000480549 MEFVO15553 781 aaPredicted RBP18.07■□□□□ 0.48
SH3D21-203ENST00000480549 ZMYND10O75800 440 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 TCF7P36402 384 aaPredicted RBP18.07■□□□□ 0.48
SH3D21-203ENST00000480549 GPD1LQ8N335 351 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 U2AF1L4Q8WU68 220 aaKnown RBP18.07■□□□□ 0.48
SH3D21-203ENST00000480549 MMP19Q99542 508 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 ENO4A6NNW6 628 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 FTCDO95954 541 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 ABCD1P33897 745 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 STAT5BP51692 787 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 GSPT2Q8IYD1 628 aaKnown RBP18.07■□□□□ 0.48
SH3D21-203ENST00000480549 VIPAS39Q9H9C1 493 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 TOPORSQ9NS56 1045 aaPredicted RBP18.07■□□□□ 0.48
SH3D21-203ENST00000480549 EZRP15311 586 aaKnown RBP18.07■□□□□ 0.48
SH3D21-203ENST00000480549 NAMPTP43490 491 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 B4GALNT4Q76KP1 1039 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 MICAL1Q8TDZ2 1067 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 SEPT1Q8WYJ6 367 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 KAT5Q92993 513 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 SPDL1Q96EA4 605 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 TMEM8AQ9HCN3 771 aa18.07■□□□□ 0.48
SH3D21-203ENST00000480549 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.07■□□□□ 0.481e-6■■■□□ 17.8
SH3D21-203ENST00000480549 H2AFZP0C0S5 128 aa18.06■□□□□ 0.48
SH3D21-203ENST00000480549 RFC5P40937 340 aa18.06■□□□□ 0.48
SH3D21-203ENST00000480549 ITIH3Q06033 890 aa18.06■□□□□ 0.48
SH3D21-203ENST00000480549 C2orf54Q08AI8 447 aa18.06■□□□□ 0.48
SH3D21-203ENST00000480549 FAM160B1Q5W0V3 765 aa18.06■□□□□ 0.48
SH3D21-203ENST00000480549 KRT39Q6A163 491 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms