RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 PRPSAP2O60256 369 aa12.86□□□□□ -0.35
PCCB-214ENST00000478469 CXCR5P32302 372 aa12.86□□□□□ -0.35
PCCB-214ENST00000478469 PSEN2P49810 448 aa12.86□□□□□ -0.35
PCCB-214ENST00000478469 ZRSR2Q15696 482 aaKnown RBP12.86□□□□□ -0.35
PCCB-214ENST00000478469 GJC2Q5T442 439 aaPredicted RBP12.86□□□□□ -0.35
PCCB-214ENST00000478469 CCDC91Q7Z6B0 441 aa12.86□□□□□ -0.35
PCCB-214ENST00000478469 MMTAG2Q9BU76 263 aaKnown RBP12.86□□□□□ -0.35
PCCB-214ENST00000478469 CALN1Q9BXU9 219 aa12.86□□□□□ -0.35
PCCB-214ENST00000478469 HAUS2Q9NVX0 235 aa12.86□□□□□ -0.35
PCCB-214ENST00000478469 RNF14Q9UBS8 474 aa12.86□□□□□ -0.35
PCCB-214ENST00000478469 MORC2Q9Y6X9 1032 aaPredicted RBP12.86□□□□□ -0.35
PCCB-214ENST00000478469 CHD4Q14839 1912 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 SSU72P8A0A1W2PR75 194 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 EVI5O60447 810 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 FLT3LGP49771 235 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 BEX3Q00994 111 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 HDXQ7Z353 690 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 COL20A1Q9P218 1284 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 TRAF3IP3Q9Y228 551 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 LRRD1A4D1F6 860 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 PGRMC1O00264 195 aaKnown RBP12.85□□□□□ -0.35
PCCB-214ENST00000478469 KCNJ6P48051 423 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 NPY5RQ15761 445 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 ERCC6LQ2NKX8 1250 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 KIAA1755Q5JYT7 1200 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 NME8Q8N427 588 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 DNAJB3Q8WWF6 145 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 AGPAT1Q99943 283 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 MTIF3Q9H2K0 278 aaKnown RBP12.85□□□□□ -0.35
PCCB-214ENST00000478469 DDX41Q9UJV9 622 aaKnown RBP12.85□□□□□ -0.35
PCCB-214ENST00000478469 EFCAB8A8MWE9 144 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 NDC80O14777 642 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 TBC1D8O95759 1140 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 GYPCP04921 128 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 EZRP15311 586 aaKnown RBP12.85□□□□□ -0.35
PCCB-214ENST00000478469 ZNF18P17022 549 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 PSMA2P25787 234 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 CLK2P49760 499 aaKnown RBP12.85□□□□□ -0.35
PCCB-214ENST00000478469 SRGAP1Q7Z6B7 1085 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 RNF10Q8N5U6 811 aaKnown RBP12.85□□□□□ -0.35
PCCB-214ENST00000478469 TJP1Q07157 1748 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 NRAPQ86VF7 1730 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 SYNGAP1Q96PV0 1343 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 SPATA31C1P0DKV0 1188 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 ARL4AP40617 200 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 BFSP2Q13515 415 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 NCAPHQ15003 741 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 KLHDC7AQ5VTJ3 777 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 CDKAL1Q5VV42 579 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
PCCB-214ENST00000478469 BRI3BPQ8WY22 251 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 L3MBTL3Q96JM7 780 aaPredicted RBP12.85□□□□□ -0.35
PCCB-214ENST00000478469 SLC12A6Q9UHW9 1150 aa12.85□□□□□ -0.35
PCCB-214ENST00000478469 MSCO60682 206 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 UPP2O95045 317 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 KRT1P04264 644 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 PMS1P54277 932 aaKnown RBP12.84□□□□□ -0.35
PCCB-214ENST00000478469 MTF1Q14872 753 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 TC2NQ8N9U0 490 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 APPL2Q8NEU8 664 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 PBKQ96KB5 322 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 PI4K2AQ9BTU6 479 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 NIF3L1Q9GZT8 377 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 RNF208Q9H0X6 261 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 RBPJLQ9UBG7 517 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 UBQLN1Q9UMX0 589 aaKnown RBP12.84□□□□□ -0.35
PCCB-214ENST00000478469 LOC102724159A0A0B4J2E5 919 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 H7C0C1 242 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 SKIP12755 728 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 ATP5OP48047 213 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 ATN1P54259 1190 aaPredicted RBP12.84□□□□□ -0.35
PCCB-214ENST00000478469 PSMC1P62191 440 aaKnown RBP12.84□□□□□ -0.35
PCCB-214ENST00000478469 CBX1P83916 185 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 MDM2Q00987 491 aaPredicted RBP12.84□□□□□ -0.35
PCCB-214ENST00000478469 PWP2Q15269 919 aaKnown RBP12.84□□□□□ -0.35
PCCB-214ENST00000478469 CDO1Q16878 200 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 CXCL17Q6UXB2 119 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 RBBP8NLQ8NC74 664 aaPredicted RBP12.84□□□□□ -0.35
PCCB-214ENST00000478469 VAV3Q9UKW4 847 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 H0YHG0 523 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 KIAA0754O94854 1291 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 HSPA6P17066 643 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 SLC18A3Q16572 532 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 RFX6Q8HWS3 928 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 CD302Q8IX05 232 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 KRT222Q8N1A0 295 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 TMC2Q8TDI7 906 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 NCAPGQ9BPX3 1015 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 PDGFCQ9NRA1 345 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 PCDHB2Q9Y5E7 798 aa12.84□□□□□ -0.35
PCCB-214ENST00000478469 SIPA1L3O60292 1781 aaPredicted RBP12.84□□□□□ -0.35
PCCB-214ENST00000478469 FKTNO75072 461 aa12.83□□□□□ -0.35
PCCB-214ENST00000478469 ADORA2BP29275 332 aa12.83□□□□□ -0.35
PCCB-214ENST00000478469 ADCY8P40145 1251 aa12.83□□□□□ -0.35
PCCB-214ENST00000478469 ZPBP2Q6X784 338 aa12.83□□□□□ -0.35
PCCB-214ENST00000478469 PLPPR4Q7Z2D5 763 aa12.83□□□□□ -0.35
PCCB-214ENST00000478469 ZNF710Q8N1W2 664 aa12.83□□□□□ -0.35
PCCB-214ENST00000478469 ZBTB9Q96C00 473 aa12.83□□□□□ -0.35
PCCB-214ENST00000478469 DNAJC19Q96DA6 116 aa12.83□□□□□ -0.35
PCCB-214ENST00000478469 HPDLQ96IR7 371 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms