RNA–Protein interactions for RNA: ENST00000478172.1

TCAF1-204, Transcript of TRPM8 channel associated factor 1, human

TSL 4

Gene TCAF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCAF1-204	ENST00000478172	RUBCN	Q92622	972 aa		11.74	□□□□□ -0.53
TCAF1-204	ENST00000478172	HAS1	Q92839	578 aa		11.74	□□□□□ -0.53
TCAF1-204	ENST00000478172	FGF14	Q92915	247 aa		11.74	□□□□□ -0.53
TCAF1-204	ENST00000478172	SHD	Q96IW2	340 aa		11.74	□□□□□ -0.53
TCAF1-204	ENST00000478172	NAP1L4	Q99733	375 aa	Known RBP	11.74	□□□□□ -0.53
TCAF1-204	ENST00000478172	PHF20	Q9BVI0	1012 aa		11.74	□□□□□ -0.53
TCAF1-204	ENST00000478172	XPNPEP1	Q9NQW7	623 aa		11.74	□□□□□ -0.53
TCAF1-204	ENST00000478172	SLC2A4RG	Q9NR83	387 aa		11.74	□□□□□ -0.53
TCAF1-204	ENST00000478172	DLGAP2	Q9P1A6	1054 aa		11.74	□□□□□ -0.53
TCAF1-204	ENST00000478172	CYP46A1	Q9Y6A2	500 aa		11.74	□□□□□ -0.53
TCAF1-204	ENST00000478172	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.74	□□□□□ -0.53	9e-6	■■■■■ 68.9
TCAF1-204	ENST00000478172	CASTOR2	A6NHX0	329 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	TBX3	O15119	743 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	CCL16	O15467	120 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	KIN	O60870	393 aa	Known RBP	11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	DTNB	O60941	627 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	GLUL	P15104	373 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	XBP1	P17861	261 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	GPC5	P78333	572 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	UBXN2B	Q14CS0	331 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	AMHR2	Q16671	573 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	TMEM132A	Q24JP5	1023 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	OTOGL	Q3ZCN5	2332 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	PPM1L	Q5SGD2	360 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	SLC27A1	Q6PCB7	646 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	LILRA6	Q6PI73	481 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	PARM1	Q6UWI2	310 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	SLFN12	Q8IYM2	578 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	FAM177A1	Q8N128	213 aa	Predicted RBP	11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	ZNF274	Q96GC6	653 aa	Predicted RBP	11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	PAAF1	Q9BRP4	392 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	RPP25	Q9BUL9	199 aa	Known RBP	11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	GJB4	Q9NTQ9	266 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	FBXW11	Q9UKB1	542 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	CDH7	Q9ULB5	785 aa		11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.73	□□□□□ -0.53
TCAF1-204	ENST00000478172	LRRIQ4	A6NIV6	560 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	LAMTOR5	O43504	91 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	USO1	O60763	962 aa	Known RBP	11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	DGAT1	O75907	488 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	CDKL5	O76039	1030 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	C1R	P00736	705 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	C8A	P07357	584 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	GLRA2	P23416	452 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	STARD6	P59095	220 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	SPIRE1	Q08AE8	756 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	PSMD5	Q16401	504 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	FAM171A1	Q5VUB5	890 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	MTSS1L	Q765P7	747 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	MAEA	Q7L5Y9	396 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	GSTCD	Q8NEC7	633 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	OXER1	Q8TDS5	423 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	KXD1	Q9BQD3	176 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	TTPAL	Q9BTX7	342 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	BCO2	Q9BYV7	579 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	ZSWIM6	Q9HCJ5	1215 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	NCDN	Q9UBB6	729 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	CEP250	Q9BV73	2442 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	TRIP11	Q15643	1979 aa		11.72	□□□□□ -0.53
TCAF1-204	ENST00000478172	KANSL1L	A0AUZ9	987 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	FAM205C	A6NFA0	338 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	XYLB	O75191	536 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	SLITRK3	O94933	977 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	KIF4A	O95239	1232 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	PAPLN	O95428	1278 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	ARL2	P36404	184 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	POU5F1B	Q06416	359 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	TUSC3	Q13454	348 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	MLF2	Q15773	248 aa	Predicted RBP	11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	GPR65	Q8IYL9	337 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	ITFG1	Q8TB96	612 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	SLC7A14	Q8TBB6	771 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	PIGO	Q8TEQ8	1089 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	FGF13	Q92913	245 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	PDRG1	Q9NUG6	133 aa		11.71	□□□□□ -0.53
TCAF1-204	ENST00000478172	NOTCH4	Q99466	2003 aa		11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	ZMYM2	Q9UBW7	1377 aa		11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172		A0A087WWV3	80 aa		11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	LIG1	P18858	919 aa		11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	CD72	P21854	359 aa		11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	RARRES1	P49788	294 aa		11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	CSTF1	Q05048	431 aa	Known RBP	11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	SCRN1	Q12765	414 aa		11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	CALCRL	Q16602	461 aa		11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	SLC44A4	Q53GD3	710 aa		11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	EARS2	Q5JPH6	523 aa	Known RBP	11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	ZBTB8OS	Q8IWT0	167 aa		11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	SUMF1	Q8NBK3	374 aa		11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	ING5	Q8WYH8	240 aa		11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	PIK3R5	Q8WYR1	880 aa		11.7	□□□□□ -0.54
TCAF1-204	ENST00000478172	CLSTN3	Q9BQT9	956 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms