RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 NYAP2Q9P242 653 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 HACL1Q9UJ83 578 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 HDAC9Q9UKV0 1011 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 PCDHA12Q9UN75 941 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 PLAGL2Q9UPG8 496 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 SIK3Q9Y2K2 1263 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 SSU72P8A0A1W2PR75 194 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 F8W031 263 aaPredicted RBP5.42□□□□□ -1.54
SF3B6-202ENST00000478050 TBX3O15119 743 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 PJA2O43164 708 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 TREHO43280 583 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 PPP1R11O60927 126 aaPredicted RBP5.42□□□□□ -1.54
SF3B6-202ENST00000478050 ATP1A1P05023 1023 aaKnown RBP5.42□□□□□ -1.54
SF3B6-202ENST00000478050 RHOXF2BP0C7M4 288 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 IDEP14735 1019 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 PRLRP16471 622 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 CYP2C19P33261 490 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 CRKP46108 304 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 KLK7P49862 253 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 EIF6P56537 245 aaKnown RBP5.42□□□□□ -1.54
SF3B6-202ENST00000478050 FKBP3Q00688 224 aaKnown RBP5.42□□□□□ -1.54
SF3B6-202ENST00000478050 ATP2B2Q01814 1243 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 ITIH3Q06033 890 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 QRICH1Q2TAL8 776 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 CCDC40Q4G0X9 1142 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 ZCWPW2Q504Y3 356 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 HAUS3Q68CZ6 603 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 SLFN13Q68D06 897 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 NCAPH2Q6IBW4 605 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 TTBK2Q6IQ55 1244 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 ALKBH2Q6NS38 261 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 APOBEC3HQ6NTF7 200 aaKnown RBP5.42□□□□□ -1.54
SF3B6-202ENST00000478050 PDXDC1Q6P996 788 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 LRRC55Q6ZSA7 311 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 KCTD1Q719H9 257 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 KSR1Q8IVT5 923 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 ZC3H3Q8IXZ2 948 aaKnown RBP5.42□□□□□ -1.54
SF3B6-202ENST00000478050 SHISA5Q8N114 240 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 TRIM58Q8NG06 486 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 ERMNQ8TAM6 284 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 SYN2Q92777 582 aaPredicted RBP5.42□□□□□ -1.54
SF3B6-202ENST00000478050 HAS1Q92839 578 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 SECISBP2LQ93073 1101 aaKnown RBP5.42□□□□□ -1.54
SF3B6-202ENST00000478050 EXOC4Q96A65 974 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 DNAJC19Q96DA6 116 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 MASTLQ96GX5 879 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 ZDHHC15Q96MV8 337 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 FAM161BQ96MY7 647 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 PNKPQ96T60 521 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 RHOXF2Q9BQY4 288 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 IDI2Q9BXS1 227 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 ANO3Q9BYT9 981 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 DEF6Q9H4E7 631 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 SH2D4AQ9H788 454 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 MMRN2Q9H8L6 949 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 VIPAS39Q9H9C1 493 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 KANSL2Q9H9L4 492 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 LRRC4CQ9HCJ2 640 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 ABCB6Q9NP58 842 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 KCNMB3Q9NPA1 279 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 LUC7LQ9NQ29 371 aaKnown RBP5.42□□□□□ -1.54
SF3B6-202ENST00000478050 ST7Q9NRC1 585 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 PANK4Q9NVE7 773 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 PSD3Q9NYI0 1048 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.42□□□□□ -1.54
SF3B6-202ENST00000478050 CEP72Q9P209 647 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 STIM2Q9P246 746 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 TRIM10Q9UDY6 481 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 ZHX1Q9UKY1 873 aaPredicted RBP5.42□□□□□ -1.54
SF3B6-202ENST00000478050 FAM184BQ9ULE4 1060 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 L1RE1Q9UN81 338 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 COL4A3BPQ9Y5P4 624 aa5.42□□□□□ -1.54
SF3B6-202ENST00000478050 KIAA0100Q14667 2235 aaKnown RBP5.42□□□□□ -1.54
SF3B6-202ENST00000478050 SMCHD1A6NHR9 2005 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 FRMD3A2A2Y4 597 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 TRAF5O00463 557 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 TNFRSF10BO14763 440 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 POLR3GO15318 223 aaPredicted RBP5.41□□□□□ -1.54
SF3B6-202ENST00000478050 AKR1B10O60218 316 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 FZD6O60353 706 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 PAPLNO95428 1278 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 FOSP01100 380 aaPredicted RBP5.41□□□□□ -1.54
SF3B6-202ENST00000478050 KRT18P05783 430 aaKnown RBP5.41□□□□□ -1.54
SF3B6-202ENST00000478050 PLA2G4BP0C869 781 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 EEF2P13639 858 aaKnown RBP5.41□□□□□ -1.54
SF3B6-202ENST00000478050 TCP1P17987 556 aaKnown RBP5.41□□□□□ -1.54
SF3B6-202ENST00000478050 CHRNA5P30532 468 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 EPHX2P34913 555 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 SLC16A2P36021 539 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 EIF4A3P38919 411 aaKnown RBP5.41□□□□□ -1.54
SF3B6-202ENST00000478050 SLC1A4P43007 532 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 MAGEA1P43355 309 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 MMP14P50281 582 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 KIF11P52732 1056 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 VSNL1P62760 191 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 PLCB3Q01970 1234 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 TRAF1Q13077 416 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 CASP8Q14790 479 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 PLCL1Q15111 1095 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 CDC37Q16543 378 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms