RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ZMYND10O75800 440 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 PROS1P07225 676 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 FSHRP23945 695 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 TARSP26639 723 aaKnown RBP10.91□□□□□ -0.66
COL4A5-204ENST00000477429 GNA11P29992 359 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 DNM2P50570 870 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 RCAN1P53805 252 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 PSMC5P62195 406 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 CCT2P78371 535 aaKnown RBP10.91□□□□□ -0.66
COL4A5-204ENST00000477429 RING1Q06587 406 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 SLC44A4Q53GD3 710 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 FUT10Q6P4F1 479 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 RNF149Q8NC42 400 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 RDM1Q8NG50 284 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 KCNV2Q8TDN2 545 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 ASAP3Q8TDY4 903 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 HASPINQ8TF76 798 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 RSPH1Q8WYR4 309 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 STAMQ92783 540 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 NELL1Q92832 810 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 FGF13Q92913 245 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 NXPE3Q969Y0 559 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 CLSTN3Q9BQT9 956 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 LARP6Q9BRS8 491 aaKnown RBP10.91□□□□□ -0.66
COL4A5-204ENST00000477429 INO80BQ9C086 356 aaPredicted RBP10.91□□□□□ -0.66
COL4A5-204ENST00000477429 SPATA6Q9NWH7 488 aaPredicted RBP10.91□□□□□ -0.66
COL4A5-204ENST00000477429 ZDHHC7Q9NXF8 308 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.91□□□□□ -0.66
COL4A5-204ENST00000477429 RGL1Q9NZL6 768 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 USP20Q9Y2K6 914 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 MTCL1Q9Y4B5 1905 aaKnown RBP10.9□□□□□ -0.66
COL4A5-204ENST00000477429 FAM170BA6NMN3 283 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 CCL16O15467 120 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 KINO60870 393 aaKnown RBP10.9□□□□□ -0.66
COL4A5-204ENST00000477429 LILRB5O75023 590 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 CDC42EP1Q00587 391 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 UBXN2BQ14CS0 331 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 MLF2Q15773 248 aaPredicted RBP10.9□□□□□ -0.66
COL4A5-204ENST00000477429 PPM1JQ5JR12 505 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 RSPO2Q6UXX9 243 aaPredicted RBP10.9□□□□□ -0.66
COL4A5-204ENST00000477429 CYP26C1Q6V0L0 522 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 PRR23BQ6ZRT6 265 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 SRGAP1Q7Z6B7 1085 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 FERMT3Q86UX7 667 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 ZNF687Q8N1G0 1237 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 ZBTB44Q8NCP5 570 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 HDAC7Q8WUI4 952 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 ING5Q8WYH8 240 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 HAS1Q92839 578 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 KCNB2Q92953 911 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 CEP170P1Q96L14 293 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 PLEKHA4Q9H4M7 779 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 GJB4Q9NTQ9 266 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 FNIP2Q9P278 1114 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 KANSL3Q9P2N6 904 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 FBXW11Q9UKB1 542 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 CDH7Q9ULB5 785 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 LHX6Q9UPM6 363 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 SMG5Q9UPR3 1016 aaKnown RBP10.9□□□□□ -0.66
COL4A5-204ENST00000477429 DMXL2Q8TDJ6 3036 aa10.9□□□□□ -0.66
COL4A5-204ENST00000477429 TDGF1P13385 188 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 IFNAR1P17181 557 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 ARF4P18085 180 aaPredicted RBP10.89□□□□□ -0.67
COL4A5-204ENST00000477429 PDIA3P30101 505 aaKnown RBP10.89□□□□□ -0.67
COL4A5-204ENST00000477429 NLRP5P59047 1200 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 MBTD1Q05BQ5 628 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 SPIRE1Q08AE8 756 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 CAPSQ13938 189 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 EMC2Q15006 297 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 NONOQ15233 471 aaKnown RBP eCLIP10.89□□□□□ -0.67
COL4A5-204ENST00000477429 NAB2Q15742 525 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 LPAL2Q16609 132 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 INF2Q27J81 1249 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 SLC5A9Q2M3M2 681 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 SOWAHCQ53LP3 525 aaPredicted RBP10.89□□□□□ -0.67
COL4A5-204ENST00000477429 EARS2Q5JPH6 523 aaKnown RBP10.89□□□□□ -0.67
COL4A5-204ENST00000477429 ZC3H14Q6PJT7 736 aaKnown RBP10.89□□□□□ -0.67
COL4A5-204ENST00000477429 NPAS3Q8IXF0 933 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 LNX1Q8TBB1 728 aaPredicted RBP10.89□□□□□ -0.67
COL4A5-204ENST00000477429 CCDC12Q8WUD4 166 aaPredicted RBP10.89□□□□□ -0.67
COL4A5-204ENST00000477429 PSPC1Q8WXF1 523 aaKnown RBP10.89□□□□□ -0.67
COL4A5-204ENST00000477429 RNF26Q9BY78 433 aaPredicted RBP10.89□□□□□ -0.67
COL4A5-204ENST00000477429 AGXT2Q9BYV1 514 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 KCNMB3Q9NPA1 279 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 LTB4R2Q9NPC1 389 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 DNMT3BQ9UBC3 853 aaKnown RBP10.89□□□□□ -0.67
COL4A5-204ENST00000477429 ADAM28Q9UKQ2 775 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 ANGPTL2Q9UKU9 493 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 PCDHA4Q9UN74 947 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 KCNJ14Q9UNX9 436 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 SNX14Q9Y5W7 946 aa10.89□□□□□ -0.67
COL4A5-204ENST00000477429 MIA3Q5JRA6 1907 aa10.88□□□□□ -0.67
COL4A5-204ENST00000477429 CARNS1A5YM72 827 aa10.88□□□□□ -0.67
COL4A5-204ENST00000477429 FAM205CA6NFA0 338 aa10.88□□□□□ -0.67
COL4A5-204ENST00000477429 CASTOR2A6NHX0 329 aa10.88□□□□□ -0.67
COL4A5-204ENST00000477429 PTGESO14684 152 aa10.88□□□□□ -0.67
COL4A5-204ENST00000477429 LAMTOR5O43504 91 aa10.88□□□□□ -0.67
COL4A5-204ENST00000477429 KIF4AO95239 1232 aa10.88□□□□□ -0.67
COL4A5-204ENST00000477429 NPTXRO95502 500 aa10.88□□□□□ -0.67
COL4A5-204ENST00000477429 EDN1P05305 212 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms