RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 FGFBP2Q9BYJ0 223 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 FAM192AQ9GZU8 254 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 CDC42EP4Q9H3Q1 356 aaKnown RBP16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 KANSL2Q9H9L4 492 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 KCNK9Q9NPC2 374 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 USP20Q9Y2K6 914 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 PCDHAC2Q9Y5I4 1007 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 SPDYE5A6NIY4 337 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 PLA2G4BP0C869 781 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 BRAFP15056 766 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 CXCL9Q07325 125 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 TNIP1Q15025 636 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 KNOP1Q1ED39 458 aaKnown RBP16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 SLC44A5Q8NCS7 719 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 IFT43Q96FT9 208 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 GORASP1Q9BQQ3 440 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 ZSWIM1Q9BR11 485 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 MYLK2Q9H1R3 596 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 ZBTB12Q9Y330 459 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 IRF6O14896 467 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 MAGEB2O15479 319 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 COILP38432 576 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 VHLP40337 213 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 CAV1Q03135 178 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 LONRF1Q17RB8 773 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 RGS9BPQ6ZS82 235 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 SYDE1Q6ZW31 735 aaPredicted RBP16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 ADAT2Q7Z6V5 191 aaKnown RBP16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 UHMK1Q8TAS1 419 aaKnown RBP16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 ALG3Q92685 438 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 FAM136AQ96C01 138 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 SYT15Q9BQS2 421 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 CCDC28BQ9BUN5 200 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 STK33Q9BYT3 514 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 PITPNM3Q9BZ71 974 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 TLE6Q9H808 572 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 TYW1Q9NV66 732 aaKnown RBP16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 TBC1D7Q9P0N9 293 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 IGSF9BQ9UPX0 1349 aa16.31■□□□□ 0.2
CLSTN1-205ENST00000477264 NVLO15381 856 aaKnown RBP16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 SKIP12755 728 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 CYP11B2P19099 503 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 RFX1P22670 979 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 COPB2P35606 906 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 PTDSS1P48651 473 aaKnown RBP16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 SH3BGRP55822 239 aaPredicted RBP16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 NFIAQ12857 509 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 ZNF211Q13398 564 aaPredicted RBP16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 DLGAP5Q15398 846 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 BMT2Q1RMZ1 405 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 DCAF17Q5H9S7 520 aaPredicted RBP16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 ARHGAP22Q7Z5H3 698 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 DNAAF5Q86Y56 855 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 ZNF333Q96JL9 665 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 LRRC37BQ96QE4 947 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 GMLQ99445 158 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 IDI2Q9BXS1 227 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 WNT8AQ9H1J5 351 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 DHX36Q9H2U1 1008 aaKnown RBP16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 TDRD3Q9H7E2 651 aaKnown RBP16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 TMOD2Q9NZR1 351 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 ECEL1O95672 775 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 PDHA1P08559 390 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 TAC1P20366 129 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 RASA1P20936 1047 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 CACNB3P54284 484 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 OCRLQ01968 901 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 TCP10Q12799 353 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 NR1H3Q13133 447 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 ECM1Q16610 540 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 GLYCTKQ8IVS8 523 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 DHX37Q8IY37 1157 aaKnown RBP16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 RPUSD2Q8IZ73 545 aaKnown RBP16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 ARHGAP18Q8N392 663 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 GDAP1Q8TB36 358 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 SLC35C1Q96A29 364 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 ERP27Q96DN0 273 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 PRMT6Q96LA8 375 aaPredicted RBP16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 TMEM260Q9NX78 707 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 SERPINB13Q9UIV8 391 aa16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 AJAP1Q9UKB5 411 aaPredicted RBP16.3■□□□□ 0.2
CLSTN1-205ENST00000477264 FRMPD4Q14CM0 1322 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 CDH16O75309 829 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 RNF8O76064 485 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 KRT18P05783 430 aaKnown RBP16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 MAN1A1P33908 653 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 PPP1R15BQ5SWA1 713 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 TTC27Q6P3X3 843 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 EPM2AIP1Q7L775 607 aaPredicted RBP16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 OTUD6AQ7L8S5 288 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 CCDC105Q8IYK2 499 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 ANKRD35Q8N283 1001 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 VTI1AQ96AJ9 217 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 TIPINQ9BVW5 301 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 FHDC1Q9C0D6 1143 aaPredicted RBP16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 RIOX1Q9H6W3 641 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 UBN1Q9NPG3 1134 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 DDX25Q9UHL0 483 aaKnown RBP16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 LNPEPQ9UIQ6 1025 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 ZMYND8Q9ULU4 1186 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms