RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 AFAP1L1Q8TED9 768 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 TRAPPC12Q8WVT3 735 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 CRYGNQ8WXF5 182 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 GATA6Q92908 595 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 GJA10Q969M2 543 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 LRRC4CQ9HCJ2 640 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 GJB4Q9NTQ9 266 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 PDRG1Q9NUG6 133 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 CYP46A1Q9Y6A2 500 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 MYH7BA7E2Y1 1941 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 TRIP12Q14669 1992 aaPredicted RBP8.99□□□□□ -0.97
CHD6-207ENST00000476641 IGLV3-22A0A075B6J6 115 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 CCDC196A0A1B0GTZ2 297 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 MEIS1O00470 390 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 EREGO14944 169 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 LARGE1O95461 756 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 CXCL10P02778 98 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 PFKMP08237 780 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 IFNAR1P17181 557 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 RFC2P35250 354 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 ACTR2P61160 394 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 WDR5P61964 334 aaKnown RBP8.98□□□□□ -0.97
CHD6-207ENST00000476641 ADAM17P78536 824 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 SCRN1Q12765 414 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 PPFIA1Q13136 1202 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 AP3B2Q13367 1082 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 CEP55Q53EZ4 464 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 KRT40Q6A162 431 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.98□□□□□ -0.97
CHD6-207ENST00000476641 PPM1EQ8WY54 764 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 SEPT1Q8WYJ6 367 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 GLG1Q92896 1179 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 ZMYND12Q9H0C1 365 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 MTIF3Q9H2K0 278 aaKnown RBP8.98□□□□□ -0.97
CHD6-207ENST00000476641 SLC9A2Q9UBY0 812 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 ZC3H7BQ9UGR2 993 aaKnown RBP8.98□□□□□ -0.97
CHD6-207ENST00000476641 MSRAQ9UJ68 235 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 TPCN1Q9ULQ1 816 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 REV3LO60673 3130 aa8.98□□□□□ -0.97
CHD6-207ENST00000476641 TRANK1O15050 2925 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 ESYT2A0FGR8 921 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 RSPH10B2B2RC85 870 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 hCG_1984214I3L0E3 225 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 CTDNEP1O95476 244 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 FOSP01100 380 aaPredicted RBP8.97□□□□□ -0.97
CHD6-207ENST00000476641 RSPH10BP0C881 870 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 EDN3P14138 238 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 ZNF76P36508 570 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 NPY5RQ15761 445 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 RAB30Q15771 203 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 PRR16Q569H4 304 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 MARCH8Q5T0T0 291 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 TRMT1LQ7Z2T5 733 aaKnown RBP8.97□□□□□ -0.97
CHD6-207ENST00000476641 PLA2G4DQ86XP0 818 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 HERC6Q8IVU3 1022 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 REXO1Q8N1G1 1221 aaKnown RBP8.97□□□□□ -0.97
CHD6-207ENST00000476641 ZNF713Q8N859 430 aaPredicted RBP8.97□□□□□ -0.97
CHD6-207ENST00000476641 NECAB1Q8N987 351 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 DBF4BQ8NFT6 615 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 CDHR1Q96JP9 859 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 RNF26Q9BY78 433 aaPredicted RBP8.97□□□□□ -0.97
CHD6-207ENST00000476641 TM6SF1Q9BZW5 370 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 EHMT1Q9H9B1 1298 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 ZNF215Q9UL58 517 aaPredicted RBP8.97□□□□□ -0.97
CHD6-207ENST00000476641 KCNJ14Q9UNX9 436 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 TANC1Q9C0D5 1861 aa8.97□□□□□ -0.97
CHD6-207ENST00000476641 PRRC2BQ5JSZ5 2229 aaKnown RBP8.96□□□□□ -0.97
CHD6-207ENST00000476641 TMEM265A0A087WTH1 108 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 CHRNA1P02708 482 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 CENPBP07199 599 aaPredicted RBP8.96□□□□□ -0.98
CHD6-207ENST00000476641 GHRP10912 638 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 ADH5P11766 374 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 ACTN1P12814 892 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 INSRRP14616 1297 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 RAB6AP20340 208 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 MZF1P28698 734 aaPredicted RBP8.96□□□□□ -0.98
CHD6-207ENST00000476641 AK2P54819 239 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 NLRP5P59047 1200 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 AKAP17AQ02040 695 aaKnown RBP8.96□□□□□ -0.98
CHD6-207ENST00000476641 SSRP1Q08945 709 aaKnown RBP8.96□□□□□ -0.98
CHD6-207ENST00000476641 TMEM62Q0P6H9 643 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 ST3GAL1Q11201 340 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 PLCB4Q15147 1175 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 CCDC85BQ15834 202 aaPredicted RBP8.96□□□□□ -0.98
CHD6-207ENST00000476641 ERICH6BQ5W0A0 696 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 CNKSR3Q6P9H4 555 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 CCDC60Q8IWA6 550 aaPredicted RBP8.96□□□□□ -0.98
CHD6-207ENST00000476641 GIMAP8Q8ND71 665 aaPredicted RBP8.96□□□□□ -0.98
CHD6-207ENST00000476641 HELQQ8TDG4 1101 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 DNAJB3Q8WWF6 145 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 LENG9Q96B70 501 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 SDF4Q9BRK5 362 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 BHLHE41Q9C0J9 482 aaPredicted RBP8.96□□□□□ -0.98
CHD6-207ENST00000476641 FAM49AQ9H0Q0 323 aaPredicted RBP8.96□□□□□ -0.98
CHD6-207ENST00000476641 SLC28A3Q9HAS3 691 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 C6orf50Q9HD87 102 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 PCDHA11Q9Y5I1 949 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 NFASCO94856 1347 aa8.96□□□□□ -0.98
CHD6-207ENST00000476641 CPLX1O14810 134 aa8.95□□□□□ -0.98
CHD6-207ENST00000476641 EPB41L2O43491 1005 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms