RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 FDPSP14324 419 aaKnown RBP11.99□□□□□ -0.49
CDRT1-205ENST00000475944 TUSC3Q13454 348 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 FAM187BQ17R55 369 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 TMEM132AQ24JP5 1023 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 MAEAQ7L5Y9 396 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 DIS3L2Q8IYB7 885 aaKnown RBP11.99□□□□□ -0.49
CDRT1-205ENST00000475944 GTF3C6Q969F1 213 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 MTMR9Q96QG7 549 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 TBC1D17Q9HA65 648 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 TUFT1Q9NNX1 390 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 CA14Q9ULX7 337 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 ZFP37Q9Y6Q3 630 aaPredicted RBP11.99□□□□□ -0.49
CDRT1-205ENST00000475944 THP07101 528 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 RPL17P18621 184 aaKnown RBP11.98□□□□□ -0.49
CDRT1-205ENST00000475944 ATP2B1P20020 1258 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 ME3Q16798 604 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 LIN9Q5TKA1 542 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 CDCA2Q69YH5 1023 aaPredicted RBP11.98□□□□□ -0.49
CDRT1-205ENST00000475944 PHLDB3Q6NSJ2 640 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 PDXDC1Q6P996 788 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 PRSS55Q6UWB4 352 aaPredicted RBP11.98□□□□□ -0.49
CDRT1-205ENST00000475944 CEP57Q86XR8 500 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 ADSSL1Q8N142 457 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 NECAB1Q8N987 351 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 NSUN7Q8NE18 718 aaKnown RBP11.98□□□□□ -0.49
CDRT1-205ENST00000475944 GPR152Q8TDT2 470 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 PIK3R5Q8WYR1 880 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 RABGGTAQ92696 567 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 ADPGKQ9BRR6 497 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 TTPALQ9BTX7 342 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 C2orf40Q9H1Z8 148 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 SEMA4AQ9H3S1 761 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 FZD8Q9H461 694 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 GPRC5CQ9NQ84 441 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 DAXXQ9UER7 740 aaPredicted RBP11.98□□□□□ -0.49
CDRT1-205ENST00000475944 FBXW11Q9UKB1 542 aa11.98□□□□□ -0.49
CDRT1-205ENST00000475944 ZFHX2Q9C0A1 2572 aaPredicted RBP11.98□□□□□ -0.49
CDRT1-205ENST00000475944 MTCL1Q9Y4B5 1905 aaKnown RBP11.98□□□□□ -0.49
CDRT1-205ENST00000475944 CASTOR2A6NHX0 329 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 ANHXE9PGG2 379 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 WNT7AO00755 349 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 RECQL4O94761 1208 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 KIF4AO95239 1232 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 HNRNPA1P09651 372 aaKnown RBP eCLIP11.97□□□□□ -0.49
CDRT1-205ENST00000475944 SPATA31C1P0DKV0 1188 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 FSHRP23945 695 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 HOXA9P31269 272 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 MCM7P33993 719 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 ELAVL2Q12926 359 aaKnown RBP11.97□□□□□ -0.49
CDRT1-205ENST00000475944 PRPF4BQ13523 1007 aaKnown RBP11.97□□□□□ -0.49
CDRT1-205ENST00000475944 HTR4Q13639 388 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 PSMD5Q16401 504 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 MAPK6Q16659 721 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 RTP2Q5QGT7 225 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 PPM1LQ5SGD2 360 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 FAM171A1Q5VUB5 890 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 CATSPER3Q86XQ3 398 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 ERMNQ8TAM6 284 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 HASPINQ8TF76 798 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 NACC1Q96RE7 527 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 PAAF1Q9BRP4 392 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 PDZD7Q9H5P4 517 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 ARHGEF3Q9NR81 526 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 SLC2A4RGQ9NR83 387 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 SNTG2Q9NY99 539 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 CACNG4Q9UBN1 327 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 NUMBLQ9Y6R0 609 aa11.97□□□□□ -0.49
CDRT1-205ENST00000475944 A0A087WWV3 80 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 ARHGEF35A5YM69 484 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 ACKR2O00590 384 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 PTGESO14684 152 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 XYLBO75191 536 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 LARGE1O95461 756 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 PRKCBP05771 671 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 C8AP07357 584 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 NAMPTP43490 491 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 FOSBP53539 338 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 PPP2R5AQ15172 486 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 SAFBQ15424 915 aaKnown RBP eCLIP11.96□□□□□ -0.49
CDRT1-205ENST00000475944 DCLRE1AQ6PJP8 1040 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 ZC3H14Q6PJT7 736 aaKnown RBP11.96□□□□□ -0.49
CDRT1-205ENST00000475944 GRASPQ7Z6J2 395 aaPredicted RBP11.96□□□□□ -0.49
CDRT1-205ENST00000475944 DEPTORQ8TB45 409 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 LNX1Q8TBB1 728 aaPredicted RBP11.96□□□□□ -0.49
CDRT1-205ENST00000475944 SHDQ96IW2 340 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 CLSTN3Q9BQT9 956 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 POLR3CQ9BUI4 534 aaPredicted RBP11.96□□□□□ -0.49
CDRT1-205ENST00000475944 TMEM60Q9H2L4 133 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 CDH7Q9ULB5 785 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 SIT1Q9Y3P8 196 aa11.96□□□□□ -0.49
CDRT1-205ENST00000475944 CFAP54Q96N23 3096 aa11.96□□□□□ -0.5
CDRT1-205ENST00000475944 MYO15AQ9UKN7 3530 aa11.96□□□□□ -0.5
CDRT1-205ENST00000475944 DOCK8Q8NF50 2099 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 JAK2O60674 1132 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 MED24O75448 989 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 LMNAP02545 664 aaKnown RBP11.95□□□□□ -0.5
CDRT1-205ENST00000475944 DCNP07585 359 aaKnown RBP11.95□□□□□ -0.5
CDRT1-205ENST00000475944 RPA1P27694 616 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 ID4P47928 161 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 ORC2Q13416 577 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms