RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 GPRC5CQ9NQ84 441 aa17.45■□□□□ 0.38
CDPF1-206ENST00000475605 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.45■□□□□ 0.38
CDPF1-206ENST00000475605 ANKEF1Q9NU02 776 aa17.45■□□□□ 0.38
CDPF1-206ENST00000475605 FNIP2Q9P278 1114 aa17.45■□□□□ 0.38
CDPF1-206ENST00000475605 PARP2Q9UGN5 583 aa17.45■□□□□ 0.38
CDPF1-206ENST00000475605 PCDHA12Q9UN75 941 aa17.45■□□□□ 0.38
CDPF1-206ENST00000475605 VPS13AQ96RL7 3174 aa17.45■□□□□ 0.38
CDPF1-206ENST00000475605 A0A1B0GUA9 196 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 ANHXE9PGG2 379 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 TADA2AO75478 443 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 ZMYND10O75800 440 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 FDPSP14324 419 aaKnown RBP17.44■□□□□ 0.38
CDPF1-206ENST00000475605 GRIK3Q13003 919 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 HTR4Q13639 388 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 SLC27A1Q6PCB7 646 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 KCNG4Q8TDN1 519 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 HASPINQ8TF76 798 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 NXPE3Q969Y0 559 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 NFKBIZQ9BYH8 718 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 CXCL16Q9H2A7 254 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 ZDHHC7Q9NXF8 308 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.44■□□□□ 0.38
CDPF1-206ENST00000475605 ORC3Q9UBD5 711 aaPredicted RBP17.44■□□□□ 0.38
CDPF1-206ENST00000475605 LIMCH1Q9UPQ0 1083 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 NUMBLQ9Y6R0 609 aa17.44■□□□□ 0.38
CDPF1-206ENST00000475605 GVINP1Q7Z2Y8 2422 aa17.43■□□□□ 0.38
CDPF1-206ENST00000475605 TTLL13PA6NNM8 815 aa17.43■□□□□ 0.38
CDPF1-206ENST00000475605 KRT2P35908 639 aa17.43■□□□□ 0.38
CDPF1-206ENST00000475605 TXKP42681 527 aa17.43■□□□□ 0.38
CDPF1-206ENST00000475605 RARRES1P49788 294 aa17.43■□□□□ 0.38
CDPF1-206ENST00000475605 NTHL1P78549 312 aa17.43■□□□□ 0.38
CDPF1-206ENST00000475605 CALCRLQ16602 461 aa17.43■□□□□ 0.38
CDPF1-206ENST00000475605 GRASPQ7Z6J2 395 aaPredicted RBP17.43■□□□□ 0.38
CDPF1-206ENST00000475605 HACE1Q8IYU2 909 aa17.43■□□□□ 0.38
CDPF1-206ENST00000475605 TTC12Q9H892 705 aaPredicted RBP17.43■□□□□ 0.38
CDPF1-206ENST00000475605 ARHGEF3Q9NR81 526 aa17.43■□□□□ 0.38
CDPF1-206ENST00000475605 DLGAP2Q9P1A6 1054 aa17.43■□□□□ 0.38
CDPF1-206ENST00000475605 COL4A3Q01955 1670 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 CASTOR2A6NHX0 329 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 USO1O60763 962 aaKnown RBP17.42■□□□□ 0.38
CDPF1-206ENST00000475605 LRRN2O75325 713 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 C1RP00736 705 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 HSP90AA2PQ14568 343 aaPredicted RBP17.42■□□□□ 0.38
CDPF1-206ENST00000475605 DCLRE1AQ6PJP8 1040 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 PARM1Q6UWI2 310 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 CEP57Q86XR8 500 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 GPR65Q8IYL9 337 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 NECAB1Q8N987 351 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 WASF1Q92558 559 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 FGF14Q92915 247 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 ZSCAN31Q96LW9 406 aaPredicted RBP17.42■□□□□ 0.38
CDPF1-206ENST00000475605 CCDC43Q96MW1 224 aaKnown RBP17.42■□□□□ 0.38
CDPF1-206ENST00000475605 CLSTN3Q9BQT9 956 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 FOXQ1Q9C009 403 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 USP20Q9Y2K6 914 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 SIT1Q9Y3P8 196 aa17.42■□□□□ 0.38
CDPF1-206ENST00000475605 POTEMA6NI47 508 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 LRRIQ4A6NIV6 560 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 KIF4AO95239 1232 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 LMNAP02545 664 aaKnown RBP17.41■□□□□ 0.38
CDPF1-206ENST00000475605 GLULP15104 373 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 FSHRP23945 695 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 TUSC3Q13454 348 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 ME3Q16798 604 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 FAM171A1Q5VUB5 890 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 PHLDB3Q6NSJ2 640 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 LNX1Q8TBB1 728 aaPredicted RBP17.41■□□□□ 0.38
CDPF1-206ENST00000475605 GTF3C6Q969F1 213 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 BACH2Q9BYV9 841 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 SLC2A4RGQ9NR83 387 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 SNTG2Q9NY99 539 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 FBXW11Q9UKB1 542 aa17.41■□□□□ 0.38
CDPF1-206ENST00000475605 SF3B1O75533 1304 aaKnown RBP eCLIP17.41■□□□□ 0.38
CDPF1-206ENST00000475605 DCHS1Q96JQ0 3298 aa17.4■□□□□ 0.38
CDPF1-206ENST00000475605 BTBD18B2RXH4 712 aa17.4■□□□□ 0.38
CDPF1-206ENST00000475605 PTGESO14684 152 aa17.4■□□□□ 0.38
CDPF1-206ENST00000475605 ADAM12O43184 909 aa17.4■□□□□ 0.38
CDPF1-206ENST00000475605 SPATA31C1P0DKV0 1188 aa17.4■□□□□ 0.38
CDPF1-206ENST00000475605 FOSBP53539 338 aa17.4■□□□□ 0.38
CDPF1-206ENST00000475605 GPC5P78333 572 aa17.4■□□□□ 0.38
CDPF1-206ENST00000475605 CREMQ03060 361 aa17.4■□□□□ 0.38
CDPF1-206ENST00000475605 ERMP1Q7Z2K6 904 aa17.4■□□□□ 0.38
CDPF1-206ENST00000475605 TBC1D32Q96NH3 1257 aa17.4■□□□□ 0.38
CDPF1-206ENST00000475605 MTMR9Q96QG7 549 aa17.4■□□□□ 0.38
CDPF1-206ENST00000475605 TTPALQ9BTX7 342 aa17.4■□□□□ 0.38
CDPF1-206ENST00000475605 FZD8Q9H461 694 aa17.4■□□□□ 0.38
CDPF1-206ENST00000475605 MYH15Q9Y2K3 1946 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 EP300Q09472 2414 aaPredicted RBP17.39■□□□□ 0.37
CDPF1-206ENST00000475605 CCL16O15467 120 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 NEMFO60524 1076 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 LARGE1O95461 756 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 EDN1P05305 212 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 SP9P0CG40 484 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 IGFBP6P24592 240 aaPredicted RBP17.39■□□□□ 0.37
CDPF1-206ENST00000475605 NAB2Q15742 525 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 PSMD5Q16401 504 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 PPP4R3CPQ6ZMV5 832 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 NOSTRINQ8IVI9 506 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 KIAA2013Q8IYS2 634 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 PIK3R5Q8WYR1 880 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms