RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 MAP4K3Q8IVH8 894 aa17.77■□□□□ 0.44
SRM-204ENST00000475189 CCDC65Q8IXS2 484 aa17.77■□□□□ 0.44
SRM-204ENST00000475189 CEP57L1Q8IYX8 460 aa17.77■□□□□ 0.44
SRM-204ENST00000475189 BICD1Q96G01 975 aa17.77■□□□□ 0.44
SRM-204ENST00000475189 FAM193BQ96PV7 902 aaPredicted RBP17.77■□□□□ 0.44
SRM-204ENST00000475189 HAPLN2Q9GZV7 340 aa17.77■□□□□ 0.44
SRM-204ENST00000475189 MRPL44Q9H9J2 332 aaKnown RBP17.77■□□□□ 0.44
SRM-204ENST00000475189 OLFML3Q9NRN5 406 aa17.77■□□□□ 0.44
SRM-204ENST00000475189 ANKFY1Q9P2R3 1169 aa17.77■□□□□ 0.44
SRM-204ENST00000475189 EYSQ5T1H1 3165 aa17.77■□□□□ 0.43
SRM-204ENST00000475189 PDCD11Q14690 1871 aaKnown RBP17.76■□□□□ 0.43
SRM-204ENST00000475189 CARNS1A5YM72 827 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 PTGESO14684 152 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 CLDN3O15551 220 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 HARSP12081 509 aaKnown RBP17.76■□□□□ 0.43
SRM-204ENST00000475189 CASP1P29466 404 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 AFMP43652 599 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 LIG4P49917 911 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 NDUFA8P51970 172 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 ASIC1P78348 528 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 MCL1Q07820 350 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 COASYQ13057 564 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 NOLC1Q14978 699 aaKnown RBP eCLIP17.76■□□□□ 0.43
SRM-204ENST00000475189 SLC39A4Q6P5W5 647 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 TMEM173Q86WV6 379 aaPredicted RBP17.76■□□□□ 0.43
SRM-204ENST00000475189 COLGALT2Q8IYK4 626 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 GRAMD1CQ8IYS0 662 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 FSIP1Q8NA03 581 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 MRPS27Q92552 414 aaKnown RBP17.76■□□□□ 0.43
SRM-204ENST00000475189 HVCN1Q96D96 273 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 RPS6KC1Q96S38 1066 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 TMEM175Q9BSA9 504 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 CCDC94Q9BW85 323 aaPredicted RBP17.76■□□□□ 0.43
SRM-204ENST00000475189 FGFBP2Q9BYJ0 223 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 BLZF1Q9H2G9 400 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 GOLPH3LQ9H4A5 285 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 USP25Q9UHP3 1055 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 LZTS1Q9Y250 596 aa17.76■□□□□ 0.43
SRM-204ENST00000475189 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.75■□□□□ 0.43
SRM-204ENST00000475189 ANKRD63C9JTQ0 380 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 NRP1O14786 923 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 HNRNPDLO14979 420 aaKnown RBP17.75■□□□□ 0.43
SRM-204ENST00000475189 CSPG5O95196 566 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 ALDH2P05091 517 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 MYBP10242 640 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 IRS1P35568 1242 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 SYKP43405 635 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 CASP5P51878 434 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 ERVFC1P60507 584 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 OSTNP61366 133 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 KRT17Q04695 432 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 GRIK3Q13003 919 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 CUL4BQ13620 913 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 TIGD5Q53EQ6 642 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 BCL7CQ8WUZ0 217 aaPredicted RBP17.75■□□□□ 0.43
SRM-204ENST00000475189 PAGE5Q96GU1 130 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 IGSF21Q96ID5 467 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 NSUN3Q9H649 340 aaKnown RBP17.75■□□□□ 0.43
SRM-204ENST00000475189 CHMP5Q9NZZ3 219 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 FAN1Q9Y2M0 1017 aa17.75■□□□□ 0.43
SRM-204ENST00000475189 GCNT3O95395 438 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 THP07101 528 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 MATR3P43243 847 aaKnown RBP eCLIP17.74■□□□□ 0.43
SRM-204ENST00000475189 KCNA1Q09470 495 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 NAB2Q15742 525 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 SEZ6Q53EL9 994 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 TCEAL5Q5H9L2 206 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 L1TD1Q5T7N2 865 aaKnown RBP17.74■□□□□ 0.43
SRM-204ENST00000475189 ALKAL1Q6UXT8 129 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 UNC13DQ70J99 1090 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 HPS3Q969F9 1004 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 TMEM169Q96HH4 297 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 ACAP3Q96P50 834 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 IKZF4Q9H2S9 585 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 PRDM6Q9NQX0 595 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 TLR9Q9NR96 1032 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 PUF60Q9UHX1 559 aaKnown RBP17.74■□□□□ 0.43
SRM-204ENST00000475189 PCDHB13Q9Y5F0 798 aa17.74■□□□□ 0.43
SRM-204ENST00000475189 PRUNE2Q8WUY3 3088 aa17.73■□□□□ 0.43
SRM-204ENST00000475189 A0A0B4J269 797 aa17.73■□□□□ 0.43
SRM-204ENST00000475189 TISP43B9A030 160 aa17.73■□□□□ 0.43
SRM-204ENST00000475189 FSCN2O14926 492 aa17.73■□□□□ 0.43
SRM-204ENST00000475189 MEFVO15553 781 aaPredicted RBP17.73■□□□□ 0.43
SRM-204ENST00000475189 OR1G1P47890 313 aa17.73■□□□□ 0.43
SRM-204ENST00000475189 YARSP54577 528 aaKnown RBP17.73■□□□□ 0.43
SRM-204ENST00000475189 EHHADHQ08426 723 aa17.73■□□□□ 0.43
SRM-204ENST00000475189 ALCAMQ13740 583 aa17.73■□□□□ 0.43
SRM-204ENST00000475189 XKR4Q5GH76 650 aa17.73■□□□□ 0.43
SRM-204ENST00000475189 GLIS3Q8NEA6 775 aa17.73■□□□□ 0.43
SRM-204ENST00000475189 ACCSQ96QU6 501 aa17.73■□□□□ 0.43
SRM-204ENST00000475189 TOPORSQ9NS56 1045 aaPredicted RBP17.73■□□□□ 0.43
SRM-204ENST00000475189 PCDHGC5Q9Y5F6 944 aa17.73■□□□□ 0.43
SRM-204ENST00000475189 STYXL1Q9Y6J8 313 aa17.73■□□□□ 0.43
SRM-204ENST00000475189 ANK1P16157 1881 aa17.73■□□□□ 0.43
SRM-204ENST00000475189 PVALEFA0A1B0GWK0 134 aa17.72■□□□□ 0.43
SRM-204ENST00000475189 KLRC4O43908 158 aa17.72■□□□□ 0.43
SRM-204ENST00000475189 FAM189A1O60320 539 aa17.72■□□□□ 0.43
SRM-204ENST00000475189 ZNF202O95125 648 aa17.72■□□□□ 0.43
SRM-204ENST00000475189 TUSC3Q13454 348 aa17.72■□□□□ 0.43
SRM-204ENST00000475189 SKIV2LQ15477 1246 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms