RNA–Protein interactions for RNA: ENST00000474528.5

SFXN5-211, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 4,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-211ENST00000474528 WHAMMQ8TF30 809 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 CASKIN2Q8WXE0 1202 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 ZIM3Q96PE6 472 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 TLR3O15455 904 aaKnown RBP12.48□□□□□ -0.41
SFXN5-211ENST00000474528 AMPD2Q01433 879 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 WDR72Q3MJ13 1102 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 CABS1Q96KC9 395 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 HEXIM2Q96MH2 286 aaKnown RBP12.48□□□□□ -0.41
SFXN5-211ENST00000474528 SGK1O00141 431 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 RTN2O75298 545 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 NPM3O75607 178 aaKnown RBP12.48□□□□□ -0.41
SFXN5-211ENST00000474528 CCNE2O96020 404 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 PRKCBP05771 671 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 FAM153BP0C7A2 387 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 GUCY1A3Q02108 690 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 SPIRE1Q08AE8 756 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 NCOA4Q13772 614 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 TRADDQ15628 312 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 FAM153CQ494X1 144 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 CCDC38Q502W7 563 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 GLE1Q53GS7 698 aaKnown RBP12.48□□□□□ -0.41
SFXN5-211ENST00000474528 FKBP1CQ5VVH2 108 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 HGSNATQ68CP4 663 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 ERICH1Q86X53 443 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 C4orf19Q8IY42 314 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.48□□□□□ -0.41
SFXN5-211ENST00000474528 NLGN2Q8NFZ4 835 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 GPRASP2Q96D09 838 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 SUCLA2Q9P2R7 463 aaPredicted RBP12.48□□□□□ -0.41
SFXN5-211ENST00000474528 FAM153AQ9UHL3 310 aa12.48□□□□□ -0.41
SFXN5-211ENST00000474528 OATP04181 439 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 ADRB2P07550 413 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 TMEM253P0C7T8 217 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 MMGT1Q8N4V1 131 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 PRPF31Q8WWY3 499 aaKnown RBP12.47□□□□□ -0.41
SFXN5-211ENST00000474528 TMEM8AQ9HCN3 771 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 PARP2Q9UGN5 583 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 GOLGA8MH3BSY2 632 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 SLC26A4O43511 780 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 FGFR4P22455 802 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 IFRD2Q12894 506 aaPredicted RBP12.47□□□□□ -0.41
SFXN5-211ENST00000474528 SYCP2LQ5T4T6 812 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 MEI1Q5TIA1 1274 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 PPP1R21Q6ZMI0 780 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 IPO4Q8TEX9 1081 aaKnown RBP12.47□□□□□ -0.41
SFXN5-211ENST00000474528 ARL8AQ96BM9 186 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 IGSF9BQ9UPX0 1349 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 CCNA1P78396 465 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 ZKSCAN8Q15776 578 aaPredicted RBP12.47□□□□□ -0.41
SFXN5-211ENST00000474528 ZNF667Q5HYK9 610 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 ALS2CLQ60I27 953 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 IRF2BP2Q7Z5L9 587 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 AJAP1Q9UKB5 411 aaPredicted RBP12.47□□□□□ -0.41
SFXN5-211ENST00000474528 GJB6O95452 261 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 LDHAP00338 332 aaKnown RBP12.47□□□□□ -0.41
SFXN5-211ENST00000474528 SUPT20HL2P0C7V6 817 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 VGLL4Q14135 290 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 OR6B2Q6IFH4 312 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 VSIG10LQ86VR7 867 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 ATG4AQ8WYN0 398 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 MRPL4Q9BYD3 311 aaKnown RBP12.47□□□□□ -0.41
SFXN5-211ENST00000474528 RNF19AQ9NV58 838 aa12.47□□□□□ -0.41
SFXN5-211ENST00000474528 CCDC88AQ3V6T2 1871 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 ABCA3Q99758 1704 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 RNF8O76064 485 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 PTGER2P43116 358 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 MAGOHP61326 146 aaKnown RBP12.46□□□□□ -0.41
SFXN5-211ENST00000474528 NOP14P78316 857 aaKnown RBP12.46□□□□□ -0.41
SFXN5-211ENST00000474528 GJC2Q5T442 439 aaPredicted RBP12.46□□□□□ -0.41
SFXN5-211ENST00000474528 ANO5Q75V66 913 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 RBBP8NLQ8NC74 664 aaPredicted RBP12.46□□□□□ -0.41
SFXN5-211ENST00000474528 HNRNPLLQ8WVV9 542 aaKnown RBP12.46□□□□□ -0.41
SFXN5-211ENST00000474528 FAM149B1Q96BN6 582 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 SPON1Q9HCB6 807 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 MRPL47Q9HD33 250 aaKnown RBP12.46□□□□□ -0.41
SFXN5-211ENST00000474528 NKIRAS1Q9NYS0 192 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.46□□□□□ -0.41
SFXN5-211ENST00000474528 ANAPC5Q9UJX4 755 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 UBIAD1Q9Y5Z9 338 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 SYNGAP1Q96PV0 1343 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 CHD4Q14839 1912 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 MIF4GDA9UHW6 222 aaKnown RBP12.46□□□□□ -0.41
SFXN5-211ENST00000474528 NFKBIEO00221 500 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 NLRP11P59045 1033 aaKnown RBP12.46□□□□□ -0.41
SFXN5-211ENST00000474528 PPP2R5DQ14738 602 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 PPP2R5EQ16537 467 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 WDR93Q6P2C0 686 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 PALB2Q86YC2 1186 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 LNX1Q8TBB1 728 aaPredicted RBP12.46□□□□□ -0.41
SFXN5-211ENST00000474528 HSPH1Q92598 858 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 CLMNQ96JQ2 1002 aa12.46□□□□□ -0.41
SFXN5-211ENST00000474528 ZNF541Q9H0D2 1346 aa12.46□□□□□ -0.42
SFXN5-211ENST00000474528 PAPPAQ13219 1627 aa12.46□□□□□ -0.42
SFXN5-211ENST00000474528 EDIL3O43854 480 aa12.46□□□□□ -0.42
SFXN5-211ENST00000474528 CYP11B1P15538 503 aa12.46□□□□□ -0.42
SFXN5-211ENST00000474528 GPC3P51654 580 aa12.46□□□□□ -0.42
SFXN5-211ENST00000474528 IFT88Q13099 833 aa12.46□□□□□ -0.42
SFXN5-211ENST00000474528 CUL1Q13616 776 aa12.46□□□□□ -0.42
SFXN5-211ENST00000474528 DAB2IPQ5VWQ8 1189 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms