RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 P3H2Q8IVL5 708 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 KIAA0319LQ8IZA0 1049 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 CSGALNACT2Q8N6G5 542 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 EFHBQ8N7U6 833 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 OR6S1Q8NH40 331 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 OSCP1Q8WVF1 389 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 SYMPKQ92797 1274 aaKnown RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 RPGRIP1Q96KN7 1286 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 PPP1R13BQ96KQ4 1090 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 TTLL2Q9BWV7 592 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 GCOM2Q9BZD3 368 aaPredicted RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 DENND2DQ9H6A0 471 aaPredicted RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 CAAP1Q9H8G2 361 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 PCMTD2Q9NV79 361 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 CABP1Q9NZU7 370 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 RABGEF1Q9UJ41 708 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 SLC39A10Q9ULF5 831 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 ERVK-19Q9WJR5 959 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 NOX1Q9Y5S8 564 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 USP16Q9Y5T5 823 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 FHAD1B1AJZ9 1412 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 FAM83GA6ND36 823 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 CAPN8A6NHC0 703 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 EBAG9O00559 213 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 THAP12O43422 761 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 LRRN2O75325 713 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 USP14P54578 494 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 HERC3Q15034 1050 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 CCDC40Q4G0X9 1142 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 SHEQ5VZ18 495 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 SLC30A6Q6NXT4 461 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 LRIG3Q6UXM1 1119 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 ALDH16A1Q8IZ83 802 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 KIRREL3Q8IZU9 778 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 REXO1Q8N1G1 1221 aaKnown RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 NIPA2Q8N8Q9 360 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 ZNF579Q8NAF0 562 aaKnown RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 PIP4K2CQ8TBX8 421 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 CABLES1Q8TDN4 633 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 CCT6BQ92526 530 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 OTUD5Q96G74 571 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 SGCZQ96LD1 299 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 TXLNGYQ9BZA5 131 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 WDR12Q9GZL7 423 aaKnown RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 PDE7BQ9NP56 450 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 RPRD1BQ9NQG5 326 aaKnown RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 KBTBD4Q9NVX7 518 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 ATXN10Q9UBB4 475 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 FBXL21Q9UKT6 434 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 PTCH2Q9Y6C5 1203 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 CC2D2AQ9P2K1 1620 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 C15orf38-AP3S2A0A0A6YYH1 394 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 SFI1A8K8P3 1242 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 AXIN1O15169 862 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 DOK2O60496 412 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 APOA4P06727 396 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 NR3C2P08235 984 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 CPB1P15086 417 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 HNRNPUQ00839 825 aaKnown RBP eCLIP3.74□□□□□ -1.81
UBR3-208ENST00000474426 CTDSPL2Q05D32 466 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 ITGB3BPQ13352 177 aaPredicted RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 IKBKEQ14164 716 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 LASP1Q14847 261 aaKnown RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 NONOQ15233 471 aaKnown RBP eCLIP3.74□□□□□ -1.81
UBR3-208ENST00000474426 BRICD5Q6PL45 260 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 ERO1BQ86YB8 467 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 CARFQ8N187 725 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 NUP93Q8N1F7 819 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 C7orf31Q8N865 590 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 FBXO22Q8NEZ5 403 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 RASGRP4Q8TDF6 673 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 DDI1Q8WTU0 396 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 ASB12Q8WXK4 309 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 TNFRSF25Q93038 417 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 SLF1Q9BQI6 1058 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 OLA1Q9NTK5 396 aaKnown RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 ARHGEF38Q9NXL2 777 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 CNOT6Q9ULM6 557 aaKnown RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 CORO1CQ9ULV4 474 aaPredicted RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 SATB2Q9UPW6 733 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 AP1M2Q9Y6Q5 423 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 ZMYM3Q14202 1370 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 CCDC171Q6TFL3 1326 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 IQANK1A0A1B0GTG1 560 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 PMS2P1A4D2B8 440 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 PDPK1O15530 556 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 LILRB5O75023 590 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 SUPT3HO75486 399 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 FLOT1O75955 427 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 PIGNO95427 931 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 APOEP02649 317 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 HSD3B1P14060 373 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 ATP4AP20648 1035 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 ACAT1P24752 427 aaKnown RBP3.73□□□□□ -1.81
UBR3-208ENST00000474426 AARSP49588 968 aaKnown RBP eCLIP3.73□□□□□ -1.81
UBR3-208ENST00000474426 RNF144AP50876 292 aaPredicted RBP3.73□□□□□ -1.81
UBR3-208ENST00000474426 SLC12A3P55017 1021 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 VBP1P61758 197 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 RPP30P78346 268 aaKnown RBP3.73□□□□□ -1.81
UBR3-208ENST00000474426 PTPN12Q05209 780 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms