RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 EMILIN2Q9BXX0 1053 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 CCSER1Q9C0I3 900 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 S1PR5Q9H228 398 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 EPHX3Q9H6B9 360 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 PTPRHQ9HD43 1115 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 BLOC1S4Q9NUP1 217 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 MARCH5Q9NX47 278 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 LARSQ9P2J5 1176 aaKnown RBP12.29□□□□□ -0.44
CKS1B-206ENST00000474215 FBXO2Q9UK22 296 aaPredicted RBP12.29□□□□□ -0.44
CKS1B-206ENST00000474215 SSX2IPQ9Y2D8 614 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 GDAQ9Y2T3 454 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 SRPRBQ9Y5M8 271 aaKnown RBP12.29□□□□□ -0.44
CKS1B-206ENST00000474215 HCFC2Q9Y5Z7 792 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 F8W810 466 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 PTGESO14684 152 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 CNPP09543 421 aaKnown RBP12.28□□□□□ -0.44
CKS1B-206ENST00000474215 DDIT3P35638 169 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 STRN3Q13033 797 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 MCM6Q14566 821 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 SLC39A14Q15043 492 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 TPRNQ4KMQ1 711 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 KIAA0319Q5VV43 1072 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 USP49Q70CQ1 688 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 PPFIBP1Q86W92 1011 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 HSCBQ8IWL3 235 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 RNF168Q8IYW5 571 aaPredicted RBP12.28□□□□□ -0.44
CKS1B-206ENST00000474215 TMEM161BQ8NDZ6 487 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 LRRC15Q8TF66 581 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 SUSD6Q92537 303 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 RABGGTAQ92696 567 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 RAD54LQ92698 747 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 KLHL5Q96PQ7 755 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 REEP2Q9BRK0 252 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 TCHPQ9BT92 498 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 HERC2P3Q9BVR0 1158 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 C1QTNF1Q9BXJ1 281 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 CXCL16Q9H2A7 254 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 ADAM28Q9UKQ2 775 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 ODF2LQ9ULJ1 636 aa12.28□□□□□ -0.44
CKS1B-206ENST00000474215 C5orf42Q9H799 3197 aa12.27□□□□□ -0.44
CKS1B-206ENST00000474215 NCOR1O75376 2440 aa12.27□□□□□ -0.44
CKS1B-206ENST00000474215 PI4K2BG5E9Z4 385 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 H0YCG3 227 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 C2CD2LO14523 706 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 TADA2AO75478 443 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 URODP06132 367 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 HSP90AA1P07900 732 aaKnown RBP12.27□□□□□ -0.45
CKS1B-206ENST00000474215 MAPTP10636 758 aaKnown RBP12.27□□□□□ -0.45
CKS1B-206ENST00000474215 MCF2P10911 925 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 PDIA4P13667 645 aaKnown RBP12.27□□□□□ -0.45
CKS1B-206ENST00000474215 EPCAMP16422 314 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 PROZP22891 400 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 KLRC2P26717 231 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 GRM5P41594 1212 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 GLUD2P49448 558 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 ITIH3Q06033 890 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 HSP90AA2PQ14568 343 aaPredicted RBP12.27□□□□□ -0.45
CKS1B-206ENST00000474215 NAB2Q15742 525 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 ZNF568Q3ZCX4 644 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 SPECC1Q5M775 1068 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 KIAA1841Q6NSI8 718 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 ZBTB33Q86T24 672 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 CLIC6Q96NY7 704 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 USP28Q96RU2 1077 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 PAAF1Q9BRP4 392 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 CCDC94Q9BW85 323 aaPredicted RBP12.27□□□□□ -0.45
CKS1B-206ENST00000474215 APOL5Q9BWW9 433 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 PHF7Q9BWX1 381 aaPredicted RBP12.27□□□□□ -0.45
CKS1B-206ENST00000474215 GPR62Q9BZJ7 368 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 CDT1Q9H211 546 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 ADAM7Q9H2U9 754 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 TOPORSQ9NS56 1045 aaPredicted RBP12.27□□□□□ -0.45
CKS1B-206ENST00000474215 CHST7Q9NS84 486 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 CCDC39Q9UFE4 941 aa12.27□□□□□ -0.45
CKS1B-206ENST00000474215 MORC2Q9Y6X9 1032 aaPredicted RBP12.27□□□□□ -0.45
CKS1B-206ENST00000474215 CASTOR2A6NHX0 329 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 LOC730098B7Z3J9 87 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 ABLIM1O14639 778 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 TOM1L1O75674 476 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 BRD1O95696 1058 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 KRT18P05783 430 aaKnown RBP12.26□□□□□ -0.45
CKS1B-206ENST00000474215 ALADP13716 330 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 SCP2P22307 547 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 ZNF131P52739 623 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 YARSP54577 528 aaKnown RBP12.26□□□□□ -0.45
CKS1B-206ENST00000474215 NCKAP1LP55160 1127 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 OSTNP61366 133 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 DSG1Q02413 1049 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 CBX2Q14781 532 aaPredicted RBP12.26□□□□□ -0.45
CKS1B-206ENST00000474215 USP41Q3LFD5 358 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 CES5AQ6NT32 575 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 FUT10Q6P4F1 479 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 MPZL3Q6UWV2 235 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 ALKAL1Q6UXT8 129 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 ZPBP2Q6X784 338 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 HAUS6Q7Z4H7 955 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 GPR65Q8IYL9 337 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 MYCT1Q8N699 235 aa12.26□□□□□ -0.45
CKS1B-206ENST00000474215 LARP4BQ92615 738 aaKnown RBP12.26□□□□□ -0.45
CKS1B-206ENST00000474215 ZBTB45Q96K62 511 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms