RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 USP15Q9Y4E8 981 aaPredicted RBP20.46■□□□□ 0.87
CCDC171-206ENST00000474193 CLASP2O75122 1294 aaKnown RBP20.45■□□□□ 0.86
CCDC171-206ENST00000474193 TADA2AO75478 443 aa20.45■□□□□ 0.86
CCDC171-206ENST00000474193 SOD2P04179 222 aa20.45■□□□□ 0.86
CCDC171-206ENST00000474193 THP07101 528 aa20.45■□□□□ 0.86
CCDC171-206ENST00000474193 KLRC2P26717 231 aa20.45■□□□□ 0.86
CCDC171-206ENST00000474193 YARSP54577 528 aaKnown RBP20.45■□□□□ 0.86
CCDC171-206ENST00000474193 DSC1Q08554 894 aa20.45■□□□□ 0.86
CCDC171-206ENST00000474193 LEO1Q8WVC0 666 aaPredicted RBP20.45■□□□□ 0.86
CCDC171-206ENST00000474193 CLIC6Q96NY7 704 aa20.45■□□□□ 0.86
CCDC171-206ENST00000474193 PNMA5Q96PV4 448 aa20.45■□□□□ 0.86
CCDC171-206ENST00000474193 KIFC3Q9BVG8 833 aa20.45■□□□□ 0.86
CCDC171-206ENST00000474193 RUSC1Q9BVN2 902 aa20.45■□□□□ 0.86
CCDC171-206ENST00000474193 DZANK1Q9NVP4 752 aa20.45■□□□□ 0.86
CCDC171-206ENST00000474193 HCFC2Q9Y5Z7 792 aa20.45■□□□□ 0.86
CCDC171-206ENST00000474193 SPTBN5Q9NRC6 3674 aaKnown RBP20.44■□□□□ 0.86
CCDC171-206ENST00000474193 KRT18P05783 430 aaKnown RBP20.44■□□□□ 0.86
CCDC171-206ENST00000474193 ITIH3Q06033 890 aa20.44■□□□□ 0.86
CCDC171-206ENST00000474193 RAD51AP2Q09MP3 1159 aa20.44■□□□□ 0.86
CCDC171-206ENST00000474193 KCNC3Q14003 757 aa20.44■□□□□ 0.86
CCDC171-206ENST00000474193 KCNK18Q7Z418 384 aa20.44■□□□□ 0.86
CCDC171-206ENST00000474193 AUTS2Q8WXX7 1259 aa20.44■□□□□ 0.86
CCDC171-206ENST00000474193 NTPCRQ9BSD7 190 aaKnown RBP20.44■□□□□ 0.86
CCDC171-206ENST00000474193 CCDC94Q9BW85 323 aaPredicted RBP20.44■□□□□ 0.86
CCDC171-206ENST00000474193 PHF7Q9BWX1 381 aaPredicted RBP20.44■□□□□ 0.86
CCDC171-206ENST00000474193 CD320Q9NPF0 282 aa20.44■□□□□ 0.86
CCDC171-206ENST00000474193 CCDC39Q9UFE4 941 aa20.44■□□□□ 0.86
CCDC171-206ENST00000474193 TNFSF13BQ9Y275 285 aa20.44■□□□□ 0.86
CCDC171-206ENST00000474193 GDAQ9Y2T3 454 aa20.44■□□□□ 0.86
CCDC171-206ENST00000474193 TDRD15B5MCY1 1934 aaKnown RBP20.44■□□□□ 0.86
CCDC171-206ENST00000474193 GOLGA6L4A6NEF3 574 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 C19orf67A6NJJ6 358 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 SFI1A8K8P3 1242 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 PI4K2BG5E9Z4 385 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 B4GALT3O60512 393 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 PLS3P13797 630 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 RBM10P98175 930 aaKnown RBP20.43■□□□□ 0.86
CCDC171-206ENST00000474193 GRIN1Q05586 938 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 TUSC3Q13454 348 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 DHX8Q14562 1220 aaKnown RBP20.43■□□□□ 0.86
CCDC171-206ENST00000474193 PTPN14Q15678 1187 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 NT5DC1Q5TFE4 455 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 VN1R2Q8NFZ6 395 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 BCL7CQ8WUZ0 217 aaPredicted RBP20.43■□□□□ 0.86
CCDC171-206ENST00000474193 SPIRE2Q8WWL2 714 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 RIPOR3Q96MK2 946 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 EPHX3Q9H6B9 360 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 TOPORSQ9NS56 1045 aaPredicted RBP20.43■□□□□ 0.86
CCDC171-206ENST00000474193 PCDHA7Q9UN72 937 aa20.43■□□□□ 0.86
CCDC171-206ENST00000474193 TTLL13PA6NNM8 815 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 C2CD2LO14523 706 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 SLC16A4O15374 487 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 RECQL4O94761 1208 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 ADH1AP07327 375 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 SCP2P22307 547 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 GLUD2P49448 558 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 SLC12A3P55017 1021 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 CBX2Q14781 532 aaPredicted RBP20.42■□□□□ 0.86
CCDC171-206ENST00000474193 USP41Q3LFD5 358 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 ZNF568Q3ZCX4 644 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 TMEM119Q4V9L6 283 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 TMEM31Q5JXX7 168 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 SPECC1Q5M775 1068 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 DAW1Q8N136 415 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 CHAMP1Q96JM3 812 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 NECTIN4Q96NY8 510 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 ACO2Q99798 780 aaKnown RBP20.42■□□□□ 0.86
CCDC171-206ENST00000474193 HERC2P3Q9BVR0 1158 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 APOL5Q9BWW9 433 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 FAM13BQ9NYF5 915 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 ARHGAP28Q9P2N2 729 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 ADAM28Q9UKQ2 775 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 ODF2LQ9ULJ1 636 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 USP20Q9Y2K6 914 aa20.42■□□□□ 0.86
CCDC171-206ENST00000474193 DCXO43602 365 aa20.41■□□□□ 0.86
CCDC171-206ENST00000474193 MTHFRP42898 656 aa20.41■□□□□ 0.86
CCDC171-206ENST00000474193 CREMQ03060 361 aa20.41■□□□□ 0.86
CCDC171-206ENST00000474193 HSP90AA2PQ14568 343 aaPredicted RBP20.41■□□□□ 0.86
CCDC171-206ENST00000474193 ATAT1Q5SQI0 421 aa20.41■□□□□ 0.86
CCDC171-206ENST00000474193 EEF1DP3Q658K8 133 aa20.41■□□□□ 0.86
CCDC171-206ENST00000474193 GSTCDQ8NEC7 633 aa20.41■□□□□ 0.86
CCDC171-206ENST00000474193 RPGRIP1Q96KN7 1286 aa20.41■□□□□ 0.86
CCDC171-206ENST00000474193 KLHL5Q96PQ7 755 aa20.41■□□□□ 0.86
CCDC171-206ENST00000474193 CCSER1Q9C0I3 900 aa20.41■□□□□ 0.86
CCDC171-206ENST00000474193 S1PR5Q9H228 398 aa20.41■□□□□ 0.86
CCDC171-206ENST00000474193 ADAM7Q9H2U9 754 aa20.41■□□□□ 0.86
CCDC171-206ENST00000474193 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.41■□□□□ 0.86
CCDC171-206ENST00000474193 SF3B1O75533 1304 aaKnown RBP eCLIP20.4■□□□□ 0.86
CCDC171-206ENST00000474193 FAM13AO94988 1023 aa20.4■□□□□ 0.86
CCDC171-206ENST00000474193 ABCD1P33897 745 aa20.4■□□□□ 0.86
CCDC171-206ENST00000474193 MATR3P43243 847 aaKnown RBP eCLIP20.4■□□□□ 0.86
CCDC171-206ENST00000474193 ELAVL2Q12926 359 aaKnown RBP20.4■□□□□ 0.86
CCDC171-206ENST00000474193 MAPK7Q13164 816 aa20.4■□□□□ 0.86
CCDC171-206ENST00000474193 FUT10Q6P4F1 479 aa20.4■□□□□ 0.86
CCDC171-206ENST00000474193 SYCE2Q6PIF2 218 aa20.4■□□□□ 0.86
CCDC171-206ENST00000474193 GPBP1Q86WP2 473 aa20.4■□□□□ 0.86
CCDC171-206ENST00000474193 SUSD6Q92537 303 aa20.4■□□□□ 0.86
CCDC171-206ENST00000474193 BICD1Q96G01 975 aa20.4■□□□□ 0.86
CCDC171-206ENST00000474193 EPSTI1Q96J88 318 aa20.4■□□□□ 0.86
CCDC171-206ENST00000474193 TARS2Q9BW92 718 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms