RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 MVPQ14764 893 aaKnown RBP7.88□□□□□ -1.15
GPNMB-209ENST00000474157 NONOQ15233 471 aaKnown RBP eCLIP7.88□□□□□ -1.15
GPNMB-209ENST00000474157 IFI16Q16666 785 aaKnown RBP7.88□□□□□ -1.15
GPNMB-209ENST00000474157 ALDH1L2Q3SY69 923 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 PDCD4Q53EL6 469 aaKnown RBP7.88□□□□□ -1.15
GPNMB-209ENST00000474157 E4F1Q66K89 784 aaPredicted RBP7.88□□□□□ -1.15
GPNMB-209ENST00000474157 INTS3Q68E01 1043 aaKnown RBP7.88□□□□□ -1.15
GPNMB-209ENST00000474157 GALNT17Q6IS24 598 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 NEK10Q6ZWH5 1172 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 KRT77Q7Z794 578 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 PHLDB2Q86SQ0 1253 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 NDUFAF2Q8N183 169 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 ARMC10Q8N2F6 343 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 ESX1Q8N693 406 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 SUN5Q8TC36 379 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 DQX1Q8TE96 717 aaKnown RBP7.88□□□□□ -1.15
GPNMB-209ENST00000474157 XAGE3Q8WTP9 111 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 APPBP2Q92624 585 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 VMP1Q96GC9 406 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 DCAF5Q96JK2 942 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 MYRFLQ96LU7 910 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 CATSPER2Q96P56 530 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 NEK1Q96PY6 1258 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 HNRNPABQ99729 332 aaKnown RBP7.88□□□□□ -1.15
GPNMB-209ENST00000474157 CARD11Q9BXL7 1154 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 FOXQ1Q9C009 403 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 EPN3Q9H201 632 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 NOD2Q9HC29 1040 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 RMND1Q9NWS8 449 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 MKS1Q9NXB0 559 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 DCAF16Q9NXF7 216 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 SIRPGQ9P1W8 387 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 SUCLA2Q9P2R7 463 aaPredicted RBP7.88□□□□□ -1.15
GPNMB-209ENST00000474157 C2CD2Q9Y426 696 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 COMMD3-BMI1R4GMX3 469 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 ITSN1Q15811 1721 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 ABCC6O95255 1503 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 KCPQ6ZWJ8 1503 aa7.88□□□□□ -1.15
GPNMB-209ENST00000474157 CCDC194A0A1B0GVG4 234 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 FRMD3A2A2Y4 597 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 DYNC1LI2O43237 492 aaPredicted RBP7.87□□□□□ -1.15
GPNMB-209ENST00000474157 STRNO43815 780 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 AKR1B10O60218 316 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 LRIG2O94898 1065 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 FGFR1OPO95684 399 aaKnown RBP7.87□□□□□ -1.15
GPNMB-209ENST00000474157 SYF2O95926 243 aaKnown RBP7.87□□□□□ -1.15
GPNMB-209ENST00000474157 ALADP13716 330 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 MAP4P27816 1152 aaKnown RBP7.87□□□□□ -1.15
GPNMB-209ENST00000474157 MAN1A1P33908 653 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 DR1Q01658 176 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 DMPKQ09013 629 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 AGAP9Q5VTM2 703 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 ALS2CLQ60I27 953 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 TBC1D9BQ66K14 1250 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 KAZNQ674X7 775 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 GRAMD4Q6IC98 578 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 PPP4R3AQ6IN85 833 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 CCSAPQ6IQ19 270 aaPredicted RBP7.87□□□□□ -1.15
GPNMB-209ENST00000474157 TRIM65Q6PJ69 517 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 UNC5AQ6ZN44 842 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 CACNA2D4Q7Z3S7 1137 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 DAAM2Q86T65 1068 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 CD163Q86VB7 1156 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 ANKRD44Q8N8A2 993 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 IGSF22Q8N9C0 903 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 UHMK1Q8TAS1 419 aaKnown RBP7.87□□□□□ -1.15
GPNMB-209ENST00000474157 ENOX1Q8TC92 643 aaKnown RBP7.87□□□□□ -1.15
GPNMB-209ENST00000474157 FRS2Q8WU20 508 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 SKA1Q96BD8 255 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 C8orf76Q96K31 380 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 FGD4Q96M96 766 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 CLIC6Q96NY7 704 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 NUP58Q9BVL2 599 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 NUP62CLQ9H1M0 184 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 PIF1Q9H611 641 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 PREBQ9HCU5 417 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 TCF7L2Q9NQB0 619 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 PCMTD2Q9NV79 361 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 FKBP14Q9NWM8 211 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 CTTNBP2NLQ9P2B4 639 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 STK17AQ9UEE5 414 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 HERC5Q9UII4 1024 aaKnown RBP7.87□□□□□ -1.15
GPNMB-209ENST00000474157 MTUS1Q9ULD2 1270 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 NOSIPQ9Y314 301 aaKnown RBP7.87□□□□□ -1.15
GPNMB-209ENST00000474157 AKAP12Q02952 1782 aa7.87□□□□□ -1.15
GPNMB-209ENST00000474157 CICQ96RK0 1608 aaPredicted RBP7.86□□□□□ -1.15
GPNMB-209ENST00000474157 USP27XA6NNY8 438 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 C1QTNF9BB2RNN3 333 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 E9PMD0 336 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 SPECC1L-ADORA2AF8WAN1 911 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 DIAPH1O60610 1272 aaKnown RBP7.86□□□□□ -1.15
GPNMB-209ENST00000474157 RAB11FIP3O75154 756 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 GFPT2O94808 682 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 ALDH2P05091 517 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 TGFB3P10600 412 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 PORP16435 677 aaPredicted RBP7.86□□□□□ -1.15
GPNMB-209ENST00000474157 ENDOUP21128 410 aaKnown RBP7.86□□□□□ -1.15
GPNMB-209ENST00000474157 SFPQP23246 707 aaKnown RBP eCLIP7.86□□□□□ -1.15
GPNMB-209ENST00000474157 LIFRP42702 1097 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 CLCN2P51788 898 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms