RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 KANK3Q6NY19 840 aa15.04■□□□□ -0
USF1-205ENST00000473969 CNNM4Q6P4Q7 775 aa15.04■□□□□ -0
USF1-205ENST00000473969 UNC13DQ70J99 1090 aa15.04■□□□□ -0
USF1-205ENST00000473969 MAP4K3Q8IVH8 894 aa15.04■□□□□ -0
USF1-205ENST00000473969 SPPL3Q8TCT6 385 aa15.04■□□□□ -0
USF1-205ENST00000473969 POF1BQ8WVV4 589 aa15.04■□□□□ -0
USF1-205ENST00000473969 ZBTB45Q96K62 511 aaPredicted RBP15.04■□□□□ -0
USF1-205ENST00000473969 ZFP42Q96MM3 310 aa15.04■□□□□ -0
USF1-205ENST00000473969 FIZ1Q96SL8 496 aa15.04■□□□□ -0
USF1-205ENST00000473969 TMEM206Q9H813 350 aa15.04■□□□□ -0
USF1-205ENST00000473969 HPSEQ9Y251 543 aa15.04■□□□□ -0
USF1-205ENST00000473969 FAM237AA0A1B0GTK4 181 aa15.03■□□□□ -0
USF1-205ENST00000473969 PVALEFA0A1B0GWK0 134 aa15.03■□□□□ -0
USF1-205ENST00000473969 NT5C1B-RDH14C9J2C7 533 aa15.03■□□□□ -0
USF1-205ENST00000473969 INPPL1O15357 1258 aa15.03■□□□□ -0
USF1-205ENST00000473969 ACTN4O43707 911 aaKnown RBP15.03■□□□□ -0
USF1-205ENST00000473969 CSPG5O95196 566 aa15.03■□□□□ -0
USF1-205ENST00000473969 PIGRP01833 764 aa15.03■□□□□ -0
USF1-205ENST00000473969 GALTP07902 379 aa15.03■□□□□ -0
USF1-205ENST00000473969 PBX3P40426 434 aa15.03■□□□□ -0
USF1-205ENST00000473969 OR1G1P47890 313 aa15.03■□□□□ -0
USF1-205ENST00000473969 PLCB3Q01970 1234 aa15.03■□□□□ -0
USF1-205ENST00000473969 MCL1Q07820 350 aa15.03■□□□□ -0
USF1-205ENST00000473969 POSTNQ15063 836 aa15.03■□□□□ -0
USF1-205ENST00000473969 L1TD1Q5T7N2 865 aaKnown RBP15.03■□□□□ -0
USF1-205ENST00000473969 ZNF280BQ86YH2 543 aa15.03■□□□□ -0
USF1-205ENST00000473969 PAGE5Q96GU1 130 aa15.03■□□□□ -0
USF1-205ENST00000473969 MSTO1Q9BUK6 570 aa15.03■□□□□ -0
USF1-205ENST00000473969 COLEC11Q9BWP8 271 aa15.03■□□□□ -0
USF1-205ENST00000473969 EXOC1Q9NV70 894 aa15.03■□□□□ -0
USF1-205ENST00000473969 STK39Q9UEW8 545 aa15.03■□□□□ -0
USF1-205ENST00000473969 LZTS1Q9Y250 596 aa15.03■□□□□ -0
USF1-205ENST00000473969 MYH11P35749 1972 aa15.03■□□□□ -0
USF1-205ENST00000473969 LAMA2P24043 3122 aaKnown RBP15.02■□□□□ -0
USF1-205ENST00000473969 FNDC1Q4ZHG4 1894 aaPredicted RBP15.02■□□□□ -0
USF1-205ENST00000473969 DDHD2O94830 711 aa15.02■□□□□ -0
USF1-205ENST00000473969 ZNF202O95125 648 aa15.02■□□□□ -0
USF1-205ENST00000473969 MYBP10242 640 aa15.02■□□□□ -0
USF1-205ENST00000473969 CA8P35219 290 aa15.02■□□□□ -0
USF1-205ENST00000473969 AFF1P51825 1210 aaKnown RBP15.02■□□□□ -0
USF1-205ENST00000473969 CUL4BQ13620 913 aa15.02■□□□□ -0
USF1-205ENST00000473969 FAM26FQ5R3K3 315 aa15.02■□□□□ -0
USF1-205ENST00000473969 PDE12Q6L8Q7 609 aaKnown RBP15.02■□□□□ -0
USF1-205ENST00000473969 SLC39A11Q8N1S5 342 aa15.02■□□□□ -0
USF1-205ENST00000473969 TMEM87AQ8NBN3 555 aa15.02■□□□□ -0
USF1-205ENST00000473969 POMGNT1Q8WZA1 660 aa15.02■□□□□ -0
USF1-205ENST00000473969 NSUN3Q9H649 340 aaKnown RBP15.02■□□□□ -0
USF1-205ENST00000473969 ENTPD7Q9NQZ7 604 aa15.02■□□□□ -0
USF1-205ENST00000473969 TLR9Q9NR96 1032 aa15.02■□□□□ -0
USF1-205ENST00000473969 MIOSQ9NXC5 875 aa15.02■□□□□ -0
USF1-205ENST00000473969 DNAJB4Q9UDY4 337 aa15.02■□□□□ -0
USF1-205ENST00000473969 HOOK1Q9UJC3 728 aaKnown RBP15.02■□□□□ -0
USF1-205ENST00000473969 MYO9BQ13459 2157 aa15.02□□□□□ -0.01
USF1-205ENST00000473969 RALGAPA2Q2PPJ7 1873 aa15.01□□□□□ -0.01
USF1-205ENST00000473969 NRP1O14786 923 aa15.01□□□□□ -0.01
USF1-205ENST00000473969 OGTO15294 1046 aa15.01□□□□□ -0.01
USF1-205ENST00000473969 CLTAP09496 248 aa15.01□□□□□ -0.01
USF1-205ENST00000473969 SLC11A1P49279 550 aa15.01□□□□□ -0.01
USF1-205ENST00000473969 KRBA2Q6ZNG9 492 aa15.01□□□□□ -0.01
USF1-205ENST00000473969 TMC7Q7Z402 723 aa15.01□□□□□ -0.01
USF1-205ENST00000473969 COLGALT2Q8IYK4 626 aa15.01□□□□□ -0.01
USF1-205ENST00000473969 GRAMD1CQ8IYS0 662 aa15.01□□□□□ -0.01
USF1-205ENST00000473969 CEP120Q8N960 986 aa15.01□□□□□ -0.01
USF1-205ENST00000473969 IGSF21Q96ID5 467 aa15.01□□□□□ -0.01
USF1-205ENST00000473969 IPO9Q96P70 1041 aaKnown RBP15.01□□□□□ -0.01
USF1-205ENST00000473969 GOLPH3LQ9H4A5 285 aa15.01□□□□□ -0.01
USF1-205ENST00000473969 RPF1Q9H9Y2 349 aaKnown RBP15.01□□□□□ -0.01
USF1-205ENST00000473969 SLC38A7Q9NVC3 462 aa15.01□□□□□ -0.01
USF1-205ENST00000473969 PRG3Q9Y2Y8 225 aaPredicted RBP15.01□□□□□ -0.01
USF1-205ENST00000473969 TULP1O00294 542 aaPredicted RBP15□□□□□ -0.01
USF1-205ENST00000473969 EIF3DO15371 548 aaKnown RBP eCLIP15□□□□□ -0.01
USF1-205ENST00000473969 PPP1R37O75864 691 aa15□□□□□ -0.01
USF1-205ENST00000473969 PRPF6O94906 941 aaKnown RBP15□□□□□ -0.01
USF1-205ENST00000473969 CASP1P29466 404 aa15□□□□□ -0.01
USF1-205ENST00000473969 PSMD2Q13200 908 aa15□□□□□ -0.01
USF1-205ENST00000473969 TUSC3Q13454 348 aa15□□□□□ -0.01
USF1-205ENST00000473969 SEZ6Q53EL9 994 aa15□□□□□ -0.01
USF1-205ENST00000473969 FAM212AQ96EL1 285 aa15□□□□□ -0.01
USF1-205ENST00000473969 TCF25Q9BQ70 676 aa15□□□□□ -0.01
USF1-205ENST00000473969 STRA6Q9BX79 667 aa15□□□□□ -0.01
USF1-205ENST00000473969 PLEKHA5Q9HAU0 1116 aa15□□□□□ -0.01
USF1-205ENST00000473969 NGRNQ9NPE2 291 aaKnown RBP15□□□□□ -0.01
USF1-205ENST00000473969 A0A0B4J269 797 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 ANKRD63C9JTQ0 380 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 ABLIM1O14639 778 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 NCK2O43639 380 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 TADA2AO75478 443 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 LDHAP00338 332 aaKnown RBP14.99□□□□□ -0.01
USF1-205ENST00000473969 CASP5P51878 434 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 FAM160A1Q05DH4 1040 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 PPP2R3AQ06190 1150 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 DSC1Q08554 894 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 GLRA4Q5JXX5 417 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 EP400NLQ6ZTU2 488 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 DDX53Q86TM3 631 aaKnown RBP14.99□□□□□ -0.01
USF1-205ENST00000473969 VPS52Q8N1B4 723 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 GSTCDQ8NEC7 633 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 HPS3Q969F9 1004 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 SNX27Q96L92 541 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 UROC1Q96N76 676 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms