RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 RDH13Q8NBN7 331 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 FBXL18Q96ME1 805 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 MKNK1Q9BUB5 465 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 TSPYL2Q9H2G4 693 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 KIAA1586Q9HCI6 787 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 IL23AQ9NPF7 189 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 CPSF3Q9UKF6 684 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 IPPQ9Y573 584 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 PCDHB2Q9Y5E7 798 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 NLRC5Q86WI3 1866 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 PDE4DIPQ5VU43 2346 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 ZNF233A6NK53 670 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 GNA14O95837 355 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 STAG3L1P0CL83 205 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 ACRP10323 421 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 PSMC2P35998 433 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 PPIGQ13427 754 aaKnown RBP eCLIP13.66□□□□□ -0.221e-6■■■□□ 17.8
TRAPPC12-217ENST00000473348 KYAT1Q16773 422 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 CRELD2Q6UXH1 353 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 FILIP1Q7Z7B0 1213 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 RTN4RL1Q86UN2 441 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 IRF2BP1Q8IU81 584 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 TMEM192Q8IY95 271 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 HACE1Q8IYU2 909 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 RPUSD2Q8IZ73 545 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 SMG8Q8ND04 991 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 CNOT6LQ96LI5 555 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 CCDC94Q9BW85 323 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 TRAIPQ9BWF2 469 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 APOL6Q9BWW8 343 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 HSD3B7Q9H2F3 369 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 RGS18Q9NS28 235 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 C1orf112Q9NSG2 853 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 SNTG2Q9NY99 539 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 RBAKQ9NYW8 714 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 MAGEC2Q9UBF1 373 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 HES2Q9Y543 173 aa13.66□□□□□ -0.22
TRAPPC12-217ENST00000473348 A0A0U1RQF3 1178 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 KCNJ18B7U540 433 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 C9IYK1 514 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 MAPK13O15264 365 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 RECQL4O94761 1208 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 CLTAP09496 248 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 CXCL8P10145 99 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 SKIP12755 728 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 ACTN1P12814 892 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 ZNF18P17022 549 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 CYP24A1Q07973 514 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 IKBKEQ14164 716 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 KCNJ12Q14500 433 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 ENOX2Q16206 610 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 SLC24A5Q71RS6 500 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 CREBRFQ8IUR6 639 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 BRSK2Q8IWQ3 736 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 LBHD1Q9BQE6 289 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 RPF1Q9H9Y2 349 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 NR2E3Q9Y5X4 410 aa13.65□□□□□ -0.22
TRAPPC12-217ENST00000473348 COL4A6Q14031 1691 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 TULP1O00294 542 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 ENPP3O14638 875 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 ZNF623O75123 536 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 ITGA4P13612 1032 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 ATP1A3P13637 1013 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 KRT13P13646 458 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 ATF7P17544 494 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 AKAP5P24588 427 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 EEF1GP26641 437 aaKnown RBP13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 MTIF2P46199 727 aaKnown RBP13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 MARSP56192 900 aaKnown RBP13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 SPAG1Q07617 926 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 BFSP1Q12934 665 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 TCP11X2Q5H9J9 407 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 INTS8Q75QN2 995 aaKnown RBP13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 FRMD5Q7Z6J6 570 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 MRPL10Q7Z7H8 261 aaKnown RBP13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 ECHDC2Q86YB7 292 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 RNF169Q8NCN4 708 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 LPPQ93052 612 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 MFSD14AQ96MC6 490 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 ACAP3Q96P50 834 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 RNF39Q9H2S5 420 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 METTL14Q9HCE5 456 aaKnown RBP13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 PARP2Q9UGN5 583 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 ARMCX3Q9UH62 379 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 SCN1AP35498 2009 aa13.64□□□□□ -0.23
TRAPPC12-217ENST00000473348 ABHD14A-ACY1A0A1B0GW23 586 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 MEIS3P2A8K0S8 358 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 MEFVO15553 781 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 EFCAB14O75071 495 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 IL18RAPO95256 599 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 CDK11BP21127 795 aaKnown RBP13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 YARSP54577 528 aaKnown RBP13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 WNT7BP56706 349 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 POU5F1Q01860 360 aaKnown RBP13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 PPP2R3AQ06190 1150 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 PSMD6Q15008 389 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 DCAF17Q5H9S7 520 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 PSRC1Q6PGN9 363 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 ZNF598Q86UK7 904 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms