RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 GAS2O43903 313 aaKnown RBP8.93□□□□□ -0.98
USP48-207ENST00000471752 RECQL4O94761 1208 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 KIF4AO95239 1232 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 PRKCBP05771 671 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 AXLP30530 894 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 RBM25P49756 843 aaKnown RBP8.93□□□□□ -0.98
USP48-207ENST00000471752 MRE11P49959 708 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 OSTNP61366 133 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 DSG1Q02413 1049 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 ITIH3Q06033 890 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 MAPK7Q13164 816 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 SEZ6Q53EL9 994 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 GLRA4Q5JXX5 417 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 ASTLQ6HA08 431 aaPredicted RBP8.93□□□□□ -0.98
USP48-207ENST00000471752 KIAA1841Q6NSI8 718 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 CES5AQ6NT32 575 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 FUT10Q6P4F1 479 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 PLCD3Q8N3E9 789 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 TMEM105Q8N8V8 129 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 IGSF22Q8N9C0 903 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 C3orf58Q8NDZ4 430 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 RIN2Q8WYP3 895 aaPredicted RBP8.93□□□□□ -0.98
USP48-207ENST00000471752 MFSD14AQ96MC6 490 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 RIPOR3Q96MK2 946 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 CLSTN3Q9BQT9 956 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 LLPHQ9BRT6 129 aaKnown RBP8.93□□□□□ -0.98
USP48-207ENST00000471752 NFKBIZQ9BYH8 718 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 MRPL17Q9NRX2 175 aaKnown RBP8.93□□□□□ -0.98
USP48-207ENST00000471752 KANSL3Q9P2N6 904 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 LRWD1Q9UFC0 647 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 GIT1Q9Y2X7 761 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 DOCK6Q96HP0 2047 aa8.93□□□□□ -0.98
USP48-207ENST00000471752 EP300Q09472 2414 aaPredicted RBP8.92□□□□□ -0.98
USP48-207ENST00000471752 ARHGEF35A5YM69 484 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 H0Y858 1186 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 ACKR2O00590 384 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 NPR3P17342 541 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 MTHFRP42898 656 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 GLUD2P49448 558 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 GRIN1Q05586 938 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 PRPF4BQ13523 1007 aaKnown RBP8.92□□□□□ -0.98
USP48-207ENST00000471752 SAFBQ15424 915 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP48-207ENST00000471752 ZRSR1Q15695 479 aaKnown RBP8.92□□□□□ -0.98
USP48-207ENST00000471752 FAM187BQ17R55 369 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 ZBTB33Q86T24 672 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 TMEM87AQ8NBN3 555 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 LNX1Q8TBB1 728 aaPredicted RBP8.92□□□□□ -0.98
USP48-207ENST00000471752 SLC39A7Q92504 469 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 CCDC51Q96ER9 411 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 TMX3Q96JJ7 454 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 ZSCAN31Q96LW9 406 aaPredicted RBP8.92□□□□□ -0.98
USP48-207ENST00000471752 CCDC43Q96MW1 224 aaKnown RBP8.92□□□□□ -0.98
USP48-207ENST00000471752 ZMAT2Q96NC0 199 aaKnown RBP8.92□□□□□ -0.98
USP48-207ENST00000471752 TARS2Q9BW92 718 aaKnown RBP8.92□□□□□ -0.98
USP48-207ENST00000471752 TRIM6Q9C030 488 aaPredicted RBP8.92□□□□□ -0.98
USP48-207ENST00000471752 HAPLN2Q9GZV7 340 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 NT5C3AQ9H0P0 336 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 KCNK12Q9HB15 430 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 UBN1Q9NPG3 1134 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.92□□□□□ -0.98
USP48-207ENST00000471752 PRMT7Q9NVM4 692 aaPredicted RBP8.92□□□□□ -0.98
USP48-207ENST00000471752 ADAM28Q9UKQ2 775 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 GVINP1Q7Z2Y8 2422 aa8.92□□□□□ -0.98
USP48-207ENST00000471752 ARID2Q68CP9 1835 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 DMXL1Q9Y485 3027 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 GPR179Q6PRD1 2367 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 ABLIM1O14639 778 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 HIP1RO75146 1068 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 TADA2AO75478 443 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 URODP06132 367 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 SRGAP2BP0DMP2 458 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 C7P10643 843 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 BRCC3P46736 316 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 NPTX2P47972 431 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 CLCNKBP51801 687 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 CDR1P51861 262 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 PEX3P56589 373 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 HSP90AA2PQ14568 343 aaPredicted RBP8.91□□□□□ -0.98
USP48-207ENST00000471752 ARSHQ5FYA8 562 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 FAM171A1Q5VUB5 890 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 MCTP1Q6DN14 999 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 RINT1Q6NUQ1 792 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 C1orf186Q6ZWK4 172 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 CEP57Q86XR8 500 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 ZDHHC14Q8IZN3 488 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 FAM184AQ8NB25 1140 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 CNNM3Q8NE01 707 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 MCPH1Q8NEM0 835 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 SNX29Q8TEQ0 813 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 C18orf25Q96B23 403 aaPredicted RBP8.91□□□□□ -0.98
USP48-207ENST00000471752 PPP1R10Q96QC0 940 aaKnown RBP8.91□□□□□ -0.98
USP48-207ENST00000471752 ACO2Q99798 780 aaKnown RBP8.91□□□□□ -0.98
USP48-207ENST00000471752 COLEC11Q9BWP8 271 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 EMILIN2Q9BXX0 1053 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 IKZF4Q9H2S9 585 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 PTPRHQ9HD43 1115 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 DZANK1Q9NVP4 752 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 SORCS3Q9UPU3 1222 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 NR2E1Q9Y466 385 aa8.91□□□□□ -0.98
USP48-207ENST00000471752 SMIM28A0A1B0GU29 152 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms