RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 BRI3BPQ8WY22 251 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 TMEM41AQ96HV5 264 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 MRGPRX1Q96LB2 322 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 PDCD2LQ9BRP1 358 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 TTLL2Q9BWV7 592 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 EPB41L4AQ9HCS5 686 aaPredicted RBP8.01□□□□□ -1.13
SMC5-202ENST00000471372 MBNL3Q9NUK0 354 aaKnown RBP8.01□□□□□ -1.13
SMC5-202ENST00000471372 STK32BQ9NY57 414 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.01□□□□□ -1.13
SMC5-202ENST00000471372 ZFP69BQ9UJL9 534 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 FBXO9Q9UK97 447 aaPredicted RBP8.01□□□□□ -1.13
SMC5-202ENST00000471372 PCDHA1Q9Y5I3 950 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 KRTAP9-6A0A140TA67 174 aa8□□□□□ -1.13
SMC5-202ENST00000471372 ISM1B1AKI9 464 aa8□□□□□ -1.13
SMC5-202ENST00000471372 AGR2O95994 175 aa8□□□□□ -1.13
SMC5-202ENST00000471372 AMY1AP04745 511 aa8□□□□□ -1.13
SMC5-202ENST00000471372 C8BP07358 591 aa8□□□□□ -1.13
SMC5-202ENST00000471372 LTA4HP09960 611 aaKnown RBP8□□□□□ -1.13
SMC5-202ENST00000471372 HNRNPLP14866 589 aaKnown RBP eCLIP8□□□□□ -1.13
SMC5-202ENST00000471372 MALP21145 153 aa8□□□□□ -1.13
SMC5-202ENST00000471372 ECHS1P30084 290 aa8□□□□□ -1.13
SMC5-202ENST00000471372 ADCY8P40145 1251 aa8□□□□□ -1.13
SMC5-202ENST00000471372 HSPA7P48741 367 aa8□□□□□ -1.13
SMC5-202ENST00000471372 MEF2AQ02078 507 aaPredicted RBP8□□□□□ -1.13
SMC5-202ENST00000471372 TLE1Q04724 770 aa8□□□□□ -1.13
SMC5-202ENST00000471372 BLMHQ13867 455 aa8□□□□□ -1.13
SMC5-202ENST00000471372 LRP8Q14114 963 aa8□□□□□ -1.13
SMC5-202ENST00000471372 STARD3Q14849 445 aa8□□□□□ -1.13
SMC5-202ENST00000471372 UBE3CQ15386 1083 aa8□□□□□ -1.13
SMC5-202ENST00000471372 MPEG1Q2M385 716 aa8□□□□□ -1.13
SMC5-202ENST00000471372 MST1LQ2TV78 715 aa8□□□□□ -1.13
SMC5-202ENST00000471372 GRAMD4Q6IC98 578 aa8□□□□□ -1.13
SMC5-202ENST00000471372 INTS5Q6P9B9 1019 aaKnown RBP8□□□□□ -1.13
SMC5-202ENST00000471372 ZC3H18Q86VM9 953 aaKnown RBP8□□□□□ -1.13
SMC5-202ENST00000471372 STPG3Q8N7X2 389 aa8□□□□□ -1.13
SMC5-202ENST00000471372 ZNF527Q8NB42 609 aa8□□□□□ -1.13
SMC5-202ENST00000471372 PIK3C3Q8NEB9 887 aa8□□□□□ -1.13
SMC5-202ENST00000471372 SNX33Q8WV41 574 aa8□□□□□ -1.13
SMC5-202ENST00000471372 MANSC1Q9H8J5 431 aa8□□□□□ -1.13
SMC5-202ENST00000471372 GJB4Q9NTQ9 266 aa8□□□□□ -1.13
SMC5-202ENST00000471372 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8□□□□□ -1.13
SMC5-202ENST00000471372 FEZ2Q9UHY8 353 aaPredicted RBP8□□□□□ -1.13
SMC5-202ENST00000471372 MAGED2Q9UNF1 606 aaPredicted RBP8□□□□□ -1.13
SMC5-202ENST00000471372 CTNND2Q9UQB3 1225 aa8□□□□□ -1.13
SMC5-202ENST00000471372 ARIH2O95376 493 aa7.99□□□□□ -1.13
SMC5-202ENST00000471372 MAP3K12Q12852 859 aa7.99□□□□□ -1.13
SMC5-202ENST00000471372 SIM2Q14190 667 aaPredicted RBP7.99□□□□□ -1.13
SMC5-202ENST00000471372 RAB39AQ14964 217 aa7.99□□□□□ -1.13
SMC5-202ENST00000471372 PPP1R3BQ86XI6 285 aa7.99□□□□□ -1.13
SMC5-202ENST00000471372 MSL3Q8N5Y2 521 aaKnown RBP7.99□□□□□ -1.13
SMC5-202ENST00000471372 ABHD4Q8TB40 342 aa7.99□□□□□ -1.13
SMC5-202ENST00000471372 TRIM63Q969Q1 353 aa7.99□□□□□ -1.13
SMC5-202ENST00000471372 ZC3H10Q96K80 434 aaKnown RBP7.99□□□□□ -1.13
SMC5-202ENST00000471372 LDAHQ9H6V9 325 aa7.99□□□□□ -1.13
SMC5-202ENST00000471372 MYBBP1AQ9BQG0 1328 aaKnown RBP7.99□□□□□ -1.13
SMC5-202ENST00000471372 A0A1W2PPC4 97 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 M0R3H8 397 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 COBLO75128 1261 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 PHF2O75151 1096 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 CSTBP04080 98 aaKnown RBP7.98□□□□□ -1.13
SMC5-202ENST00000471372 RNASE1P07998 156 aaKnown RBP7.98□□□□□ -1.13
SMC5-202ENST00000471372 GAAP10253 952 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 SREBF1P36956 1147 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 MAPK9P45984 424 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 PER3P56645 1201 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 ZNF200P98182 395 aaPredicted RBP7.98□□□□□ -1.13
SMC5-202ENST00000471372 PLCL1Q15111 1095 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 SLC35G1Q2M3R5 365 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 WDR72Q3MJ13 1102 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 PRR16Q569H4 304 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 KHDC1LQ5JSQ8 128 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 PGBD2Q6P3X8 592 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 GADL1Q6ZQY3 521 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 PQLC1Q8N2U9 271 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 TBC1D20Q96BZ9 403 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 GCC1Q96CN9 775 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 INTS4Q96HW7 963 aaKnown RBP7.98□□□□□ -1.13
SMC5-202ENST00000471372 PPP1R16BQ96T49 567 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 COLEC11Q9BWP8 271 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 OSBPL6Q9BZF3 934 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 SARS2Q9NP81 518 aaKnown RBP7.98□□□□□ -1.13
SMC5-202ENST00000471372 CALCOCO1Q9P1Z2 691 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 COL20A1Q9P218 1284 aa7.98□□□□□ -1.13
SMC5-202ENST00000471372 SAE1Q9UBE0 346 aaPredicted RBP7.98□□□□□ -1.13
SMC5-202ENST00000471372 NT5C1B-RDH14C9J2C7 533 aa7.97□□□□□ -1.13
SMC5-202ENST00000471372 FFAR2O15552 330 aa7.97□□□□□ -1.13
SMC5-202ENST00000471372 COL6A1P12109 1028 aa7.97□□□□□ -1.13
SMC5-202ENST00000471372 PDIA3P30101 505 aaKnown RBP7.97□□□□□ -1.13
SMC5-202ENST00000471372 RTP5Q14D33 572 aa7.97□□□□□ -1.13
SMC5-202ENST00000471372 ARL13BQ3SXY8 428 aa7.97□□□□□ -1.13
SMC5-202ENST00000471372 FLYWCH1Q4VC44 716 aa7.97□□□□□ -1.13
SMC5-202ENST00000471372 C3orf38Q5JPI3 329 aa7.97□□□□□ -1.13
SMC5-202ENST00000471372 CXXC5Q7LFL8 322 aaKnown RBP7.97□□□□□ -1.13
SMC5-202ENST00000471372 STK32CQ86UX6 486 aa7.97□□□□□ -1.13
SMC5-202ENST00000471372 NKD2Q969F2 451 aaPredicted RBP7.97□□□□□ -1.13
SMC5-202ENST00000471372 MSLNLQ96KJ4 702 aa7.97□□□□□ -1.13
SMC5-202ENST00000471372 ZSWIM3Q96MP5 696 aa7.97□□□□□ -1.13
SMC5-202ENST00000471372 WDR92Q96MX6 357 aa7.97□□□□□ -1.13
SMC5-202ENST00000471372 UHRF1Q96T88 793 aaPredicted RBP7.97□□□□□ -1.13
SMC5-202ENST00000471372 P2RX7Q99572 595 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms