RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 IRX5P78411 483 aaPredicted RBP9.12□□□□□ -0.95
FDPS-209ENST00000471117 MFSD10Q14728 455 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 SYCP1Q15431 976 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 KCNA10Q16322 511 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 NFIL3Q16649 462 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 HS2ST1Q7LGA3 356 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 HAUS6Q7Z4H7 955 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 TRIM59Q8IWR1 403 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 SYCP3Q8IZU3 236 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 GOLGA5Q8TBA6 731 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 TCP11Q8WWU5 503 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 NKD2Q969F2 451 aaPredicted RBP9.12□□□□□ -0.95
FDPS-209ENST00000471117 IFT74Q96LB3 600 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 ACCSQ96QU6 501 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 PANX2Q96RD6 677 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 ERGIC2Q96RQ1 377 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 MTG1Q9BT17 334 aaPredicted RBP9.12□□□□□ -0.95
FDPS-209ENST00000471117 GBP3Q9H0R5 595 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 POLR3FQ9H1D9 316 aaPredicted RBP9.12□□□□□ -0.95
FDPS-209ENST00000471117 RNPEPQ9H4A4 650 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 ST6GALNAC4Q9H4F1 302 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 DHX33Q9H6R0 707 aaKnown RBP9.12□□□□□ -0.95
FDPS-209ENST00000471117 C17orf75Q9HAS0 396 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 XPNPEP1Q9NQW7 623 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 PRKAG3Q9UGI9 489 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 MTUS1Q9ULD2 1270 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 SCN10AQ9Y5Y9 1956 aa9.12□□□□□ -0.95
FDPS-209ENST00000471117 NAV2Q8IVL1 2488 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 MROH7Q68CQ1 1323 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 DMXL1Q9Y485 3027 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 RRN3P2A6NIE6 340 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 ZBTB42B2RXF5 422 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 RNF225M0QZC1 329 aaPredicted RBP9.11□□□□□ -0.95
FDPS-209ENST00000471117 SLC16A3O15427 465 aaKnown RBP9.11□□□□□ -0.95
FDPS-209ENST00000471117 TLR3O15455 904 aaKnown RBP9.11□□□□□ -0.95
FDPS-209ENST00000471117 MAGEB2O15479 319 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 EPB41P11171 864 aaKnown RBP9.11□□□□□ -0.95
FDPS-209ENST00000471117 CST5P28325 142 aaPredicted RBP9.11□□□□□ -0.95
FDPS-209ENST00000471117 NBL1P41271 181 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 NPTX2P47972 431 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 KCNJ6P48051 423 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 CASP4P49662 377 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 KLK7P49862 253 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 SMTNP53814 917 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 NCKAP1LP55160 1127 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 CHMP4BP1P59074 171 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 IGBP1P78318 339 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 GTF2BQ00403 316 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 PURAQ00577 322 aaKnown RBP9.11□□□□□ -0.95
FDPS-209ENST00000471117 PPFIA1Q13136 1202 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 DMP1Q13316 513 aaPredicted RBP9.11□□□□□ -0.95
FDPS-209ENST00000471117 PPP2R5AQ15172 486 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 KIAA0753Q2KHM9 967 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 IER5Q5VY09 327 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 TMEM139Q8IV31 216 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 CNGA4Q8IV77 575 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 FAM126BQ8IXS8 530 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 PCSK9Q8NBP7 692 aaKnown RBP9.11□□□□□ -0.95
FDPS-209ENST00000471117 RETREG2Q8NC44 543 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 TMEM161BQ8NDZ6 487 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 SPIRE2Q8WWL2 714 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 BSNDQ8WZ55 320 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 VWCEQ96DN2 955 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 CCDC51Q96ER9 411 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 SCLYQ96I15 445 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 PCMTD1Q96MG8 357 aaPredicted RBP9.11□□□□□ -0.95
FDPS-209ENST00000471117 CEP89Q96ST8 783 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 BAG1Q99933 345 aaPredicted RBP9.11□□□□□ -0.95
FDPS-209ENST00000471117 TSEN34Q9BSV6 310 aaKnown RBP9.11□□□□□ -0.95
FDPS-209ENST00000471117 NUP58Q9BVL2 599 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 HIPK3Q9H422 1215 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 METTL14Q9HCE5 456 aaKnown RBP9.11□□□□□ -0.95
FDPS-209ENST00000471117 AGPAT3Q9NRZ7 376 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 DMAC2Q9NW81 257 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 LMCD1Q9NZU5 365 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 ARMCX3Q9UH62 379 aaPredicted RBP9.11□□□□□ -0.95
FDPS-209ENST00000471117 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.11□□□□□ -0.95
FDPS-209ENST00000471117 PTPRSQ13332 1948 aa9.11□□□□□ -0.95
FDPS-209ENST00000471117 TET1Q8NFU7 2136 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 TTC26A0AVF1 554 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 MYADML2A6NDP7 307 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 H0YCG3 227 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 HAS3O00219 553 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 STX10O60499 249 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 ADAMTS4O75173 837 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 AKAP3O75969 853 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 SMIM10L2AP0DMW4 78 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 SMIM10L2BP0DMW5 78 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 KLRC1P26715 233 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 TMOD1P28289 359 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 ABCD1P33897 745 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 KRT9P35527 623 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 PPP2R3AQ06190 1150 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 MYBPC2Q14324 1141 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 PUM1Q14671 1186 aaKnown RBP eCLIP9.1□□□□□ -0.95
FDPS-209ENST00000471117 GRIK4Q16099 956 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 SLC9A9Q8IVB4 645 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 FAM186BQ8IYM0 893 aa9.1□□□□□ -0.95
FDPS-209ENST00000471117 RPUSD2Q8IZ73 545 aaKnown RBP9.1□□□□□ -0.95
FDPS-209ENST00000471117 METTL13Q8N6R0 699 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms