RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 RFPL2O75678 378 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 ATXN8OSP0DMR3 200 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 GBP2P32456 591 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-206ENST00000471037 OR1G1P47890 313 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 NASPP49321 788 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-206ENST00000471037 SCNN1GP51170 649 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 MXD4Q14582 209 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-206ENST00000471037 AMHR2Q16671 573 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 TTC38Q5R3I4 469 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 ERMP1Q7Z2K6 904 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 POTEDQ86YR6 584 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 MYADMQ96S97 322 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 GAD1Q99259 594 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 MTRQ99707 1265 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 NFKBIZQ9BYH8 718 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 CSRNP2Q9H175 543 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 RNF39Q9H2S5 420 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 ZSWIM4Q9H7M6 989 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.04□□□□□ -0.8
SF3A1-206ENST00000471037 BMP2KQ9NSY1 1161 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-206ENST00000471037 ZDHHC7Q9NXF8 308 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 RGL1Q9NZL6 768 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 GIT1Q9Y2X7 761 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 MORC2Q9Y6X9 1032 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-206ENST00000471037 GVINP1Q7Z2Y8 2422 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 KRBA1A5PL33 1030 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 F8W810 466 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 ZBTB39O15060 712 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 LYPLA2O95372 231 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 CFHP08603 1231 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 SRFP11831 508 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 CREMQ03060 361 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 MBTD1Q05BQ5 628 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 NCBP1Q09161 790 aaKnown RBP10.03□□□□□ -0.8
SF3A1-206ENST00000471037 TFDP1Q14186 410 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 SF3A1Q15459 793 aaKnown RBP10.03□□□□□ -0.8
SF3A1-206ENST00000471037 XKR9Q5GH70 373 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 NCAPH2Q6IBW4 605 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 FUT10Q6P4F1 479 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 LILRA6Q6PI73 481 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 SLFN12Q8IYM2 578 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 HACE1Q8IYU2 909 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 ADSSL1Q8N142 457 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 SLC44A3Q8N4M1 653 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 GSTCDQ8NEC7 633 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 KCNG4Q8TDN1 519 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 RSAD2Q8WXG1 361 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 SMG7Q92540 1137 aaKnown RBP10.03□□□□□ -0.8
SF3A1-206ENST00000471037 DYDC2Q96IM9 177 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 CPB2Q96IY4 423 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 SPATA32Q96LK8 384 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 ZFP42Q96MM3 310 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 COLEC11Q9BWP8 271 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 NT5C3AQ9H0P0 336 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 SEMA4AQ9H3S1 761 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
SF3A1-206ENST00000471037 MIOSQ9NXC5 875 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.03□□□□□ -0.8
SF3A1-206ENST00000471037 FNIP2Q9P278 1114 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 TFIP11Q9UBB9 837 aaKnown RBP10.03□□□□□ -0.8
SF3A1-206ENST00000471037 RCOR1Q9UKL0 485 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 HES2Q9Y543 173 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 CLIC4Q9Y696 253 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 SPTBN4Q9H254 2564 aa10.03□□□□□ -0.8
SF3A1-206ENST00000471037 VPS13AQ96RL7 3174 aa10.02□□□□□ -0.8
SF3A1-206ENST00000471037 ANHXE9PGG2 379 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 INO80B-WBP1J3KQ70 363 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 TGM5O43548 720 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 DGAT1O75907 488 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 SLITRK3O94933 977 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 LAMP2P13473 410 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 ARF4P18085 180 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-206ENST00000471037 ATP2B1P20020 1258 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 PTMSP20962 102 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 ARL2P36404 184 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 ID4P47928 161 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 CYP4A11Q02928 519 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 GRIK3Q13003 919 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 CAPSQ13938 189 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 CTTNQ14247 550 aaKnown RBP10.02□□□□□ -0.81
SF3A1-206ENST00000471037 SLC39A14Q15043 492 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 STK38Q15208 465 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 USP41Q3LFD5 358 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 PHLDB3Q6NSJ2 640 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 LINC00301Q8NCQ3 95 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 ASAP3Q8TDY4 903 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 LEO1Q8WVC0 666 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-206ENST00000471037 CHAMP1Q96JM3 812 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 HSD17B14Q9BPX1 270 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 GPR62Q9BZJ7 368 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 PRKD2Q9BZL6 878 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 TRIM6Q9C030 488 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-206ENST00000471037 NXF3Q9H4D5 531 aaKnown RBP10.02□□□□□ -0.81
SF3A1-206ENST00000471037 TBC1D17Q9HA65 648 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 SLC2A4RGQ9NR83 387 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 ANKEF1Q9NU02 776 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 ADAM28Q9UKQ2 775 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 PCDHB6Q9Y5E3 794 aa10.02□□□□□ -0.81
SF3A1-206ENST00000471037 A0A1B0GUA9 196 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 LAD1O00515 517 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms