RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 SH3TC2Q8TF17 1288 aa8.03□□□□□ -1.12
PTP4A1-202ENST00000470661 SEC62Q99442 399 aaKnown RBP8.03□□□□□ -1.12
PTP4A1-202ENST00000470661 PUS7LQ9H0K6 701 aaKnown RBP8.03□□□□□ -1.12
PTP4A1-202ENST00000470661 PI4KBQ9UBF8 816 aa8.03□□□□□ -1.12
PTP4A1-202ENST00000470661 SIT1Q9Y3P8 196 aa8.03□□□□□ -1.12
PTP4A1-202ENST00000470661 PCDHA2Q9Y5H9 948 aa8.03□□□□□ -1.12
PTP4A1-202ENST00000470661 PTCH2Q9Y6C5 1203 aa8.03□□□□□ -1.12
PTP4A1-202ENST00000470661 SIPA1L1O43166 1804 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 TRAV20A0A0B4J274 112 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 A0A0G2JLL6 359 aaPredicted RBP8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 DBX1A6NMT0 343 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 C22orf46C9J442 243 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 CXCL11O14625 94 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 ADCY3O60266 1144 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 TLR2O60603 784 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 FGFR1P11362 822 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 ADD2P35612 726 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 PSMC4P43686 418 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 TESK1Q15569 626 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 FBXO46Q6PJ61 603 aaPredicted RBP8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 NSMFQ6X4W1 530 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 PRRT2Q7Z6L0 340 aaPredicted RBP8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 ANKRD23Q86SG2 305 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 MZB1Q8WU39 189 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 ZNF669Q96BR6 464 aaPredicted RBP8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 CHMP4CQ96CF2 233 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 SRPK1Q96SB4 655 aaKnown RBP8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 ECHDC1Q9NTX5 307 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 MCM9Q9NXL9 1143 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 GABRQQ9UN88 632 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 PTPN22Q9Y2R2 807 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 TNRC18O15417 2968 aaPredicted RBP8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 CDK5RAP2Q96SN8 1893 aa8.02□□□□□ -1.13
PTP4A1-202ENST00000470661 DOCK2Q92608 1830 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 M0R2C6 588 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 EN2P19622 333 aaPredicted RBP8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 GUCY1A2P33402 732 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 SHMT1P34896 483 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 LINC00310P59036 64 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 LACTBP83111 547 aaPredicted RBP8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 SSPNQ14714 243 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 NTRK3Q16288 839 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 KCNA10Q16322 511 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 KIAA1755Q5JYT7 1200 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 CEP68Q76N32 757 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 FOXP4Q8IVH2 680 aaPredicted RBP8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 ANKRD13CQ8N6S4 541 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 ERO1AQ96HE7 468 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 CHAMP1Q96JM3 812 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 P2RX7Q99572 595 aaKnown RBP8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 INCENPQ9NQS7 918 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 ZBTB21Q9ULJ3 1066 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 DOCK3Q8IZD9 2030 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 ADGRA2Q96PE1 1338 aa8.01□□□□□ -1.13
PTP4A1-202ENST00000470661 MPHOSPH10O00566 681 aaKnown RBP8□□□□□ -1.13
PTP4A1-202ENST00000470661 N4BP3O15049 544 aa8□□□□□ -1.13
PTP4A1-202ENST00000470661 IFRD2Q12894 506 aaPredicted RBP8□□□□□ -1.13
PTP4A1-202ENST00000470661 SEPT2Q15019 361 aa8□□□□□ -1.13
PTP4A1-202ENST00000470661 TTF1Q15361 905 aaPredicted RBP8□□□□□ -1.13
PTP4A1-202ENST00000470661 CCDC129Q6ZRS4 1044 aa8□□□□□ -1.13
PTP4A1-202ENST00000470661 IGDCC3Q8IVU1 814 aa8□□□□□ -1.13
PTP4A1-202ENST00000470661 NETO2Q8NC67 525 aa8□□□□□ -1.13
PTP4A1-202ENST00000470661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8□□□□□ -1.13
PTP4A1-202ENST00000470661 PHF20Q9BVI0 1012 aa8□□□□□ -1.13
PTP4A1-202ENST00000470661 CRNKL1Q9BZJ0 848 aaKnown RBP8□□□□□ -1.13
PTP4A1-202ENST00000470661 LNPKQ9C0E8 428 aa8□□□□□ -1.13
PTP4A1-202ENST00000470661 DHX36Q9H2U1 1008 aaKnown RBP8□□□□□ -1.13
PTP4A1-202ENST00000470661 CHMP4BQ9H444 224 aaKnown RBP8□□□□□ -1.13
PTP4A1-202ENST00000470661 NPFFR2Q9Y5X5 522 aa8□□□□□ -1.13
PTP4A1-202ENST00000470661 SLC4A4Q9Y6R1 1079 aa8□□□□□ -1.13
PTP4A1-202ENST00000470661 PHIPQ8WWQ0 1821 aa8□□□□□ -1.13
PTP4A1-202ENST00000470661 MYH1P12882 1939 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 A0A1W2PRG0 241 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 MSCO60682 206 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 HLA-DOAP06340 250 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 FAM153BP0C7A2 387 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 AKR1B1P15121 316 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 PI3P19957 117 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 CFPP27918 469 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 PRKCZQ05513 592 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 ABCB5Q2M3G0 1257 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 CERKLQ49MI3 558 aaPredicted RBP7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 LCE3BQ5TA77 95 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 FOXB2Q5VYV0 432 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 KCNT2Q6UVM3 1135 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 FASTKD5Q7L8L6 764 aaKnown RBP7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 SIAH1Q8IUQ4 282 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 LRRC56Q8IYG6 542 aaPredicted RBP7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 TRMT2BQ96GJ1 504 aaKnown RBP7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 PEX11GQ96HA9 241 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 TMEM169Q96HH4 297 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 STRBPQ96SI9 672 aaKnown RBP7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 DNAJC7Q99615 494 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 TXNRD2Q9NNW7 524 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 HERC5Q9UII4 1024 aaKnown RBP7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 SERPINB13Q9UIV8 391 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 NUDT5Q9UKK9 219 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 CNOT6Q9ULM6 557 aaKnown RBP7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 KCTD3Q9Y597 815 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 PCDHA5Q9Y5H7 936 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms