RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 EIF4ENIF1Q9NRA8 985 aaKnown RBP34.54■■■■□ 3.12
HMG20B-209ENST00000470356 SNTG2Q9NY99 539 aa34.54■■■■□ 3.12
HMG20B-209ENST00000470356 USP20Q9Y2K6 914 aa34.54■■■■□ 3.12
HMG20B-209ENST00000470356 C1RP00736 705 aa34.53■■■■□ 3.12
HMG20B-209ENST00000470356 EDN1P05305 212 aa34.53■■■■□ 3.12
HMG20B-209ENST00000470356 MTMR3Q13615 1198 aa34.53■■■■□ 3.12
HMG20B-209ENST00000470356 KRT79Q5XKE5 535 aa34.53■■■■□ 3.12
HMG20B-209ENST00000470356 ELMSAN1Q6PJG2 1045 aa34.53■■■■□ 3.12
HMG20B-209ENST00000470356 RABGGTAQ92696 567 aa34.53■■■■□ 3.12
HMG20B-209ENST00000470356 KIFC3Q9BVG8 833 aa34.53■■■■□ 3.12
HMG20B-209ENST00000470356 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP34.53■■■■□ 3.12
HMG20B-209ENST00000470356 DNM3Q9UQ16 869 aa34.53■■■■□ 3.12
HMG20B-209ENST00000470356 PTGESO14684 152 aa34.52■■■■□ 3.12
HMG20B-209ENST00000470356 RECQL4O94761 1208 aa34.52■■■■□ 3.12
HMG20B-209ENST00000470356 GLUD1P00367 558 aa34.52■■■■□ 3.12
HMG20B-209ENST00000470356 HSP90AA2PQ14568 343 aaPredicted RBP34.52■■■■□ 3.12
HMG20B-209ENST00000470356 IL17AQ16552 155 aa34.52■■■■□ 3.12
HMG20B-209ENST00000470356 EEF1DP3Q658K8 133 aa34.52■■■■□ 3.12
HMG20B-209ENST00000470356 DTHD1Q6ZMT9 781 aa34.52■■■■□ 3.12
HMG20B-209ENST00000470356 B3GALT6Q96L58 329 aa34.52■■■■□ 3.12
HMG20B-209ENST00000470356 LIMD1Q9UGP4 676 aa34.52■■■■□ 3.12
HMG20B-209ENST00000470356 TRIP11Q15643 1979 aa34.52■■■■□ 3.12
HMG20B-209ENST00000470356 CACNA1HO95180 2353 aa34.51■■■■□ 3.12
HMG20B-209ENST00000470356 TADA2AO75478 443 aa34.51■■■■□ 3.12
HMG20B-209ENST00000470356 MCTP1Q6DN14 999 aa34.51■■■■□ 3.12
HMG20B-209ENST00000470356 CCDC149Q6ZUS6 474 aa34.51■■■■□ 3.12
HMG20B-209ENST00000470356 TMX3Q96JJ7 454 aa34.51■■■■□ 3.12
HMG20B-209ENST00000470356 PAAF1Q9BRP4 392 aa34.51■■■■□ 3.12
HMG20B-209ENST00000470356 FNIP2Q9P278 1114 aa34.51■■■■□ 3.12
HMG20B-209ENST00000470356 PP2D1A8MPX8 630 aa34.5■■■■□ 3.11
HMG20B-209ENST00000470356 E9PMD0 336 aa34.5■■■■□ 3.11
HMG20B-209ENST00000470356 THP07101 528 aa34.5■■■■□ 3.11
HMG20B-209ENST00000470356 DCAF4L1Q3SXM0 396 aa34.5■■■■□ 3.11
HMG20B-209ENST00000470356 RILPL1Q5EBL4 403 aa34.5■■■■□ 3.11
HMG20B-209ENST00000470356 NT5DC1Q5TFE4 455 aa34.5■■■■□ 3.11
HMG20B-209ENST00000470356 CYP26C1Q6V0L0 522 aa34.5■■■■□ 3.11
HMG20B-209ENST00000470356 OTOP3Q7RTS5 596 aa34.5■■■■□ 3.11
HMG20B-209ENST00000470356 HDAC7Q8WUI4 952 aa34.5■■■■□ 3.11
HMG20B-209ENST00000470356 ACSF2Q96CM8 615 aaPredicted RBP34.5■■■■□ 3.11
HMG20B-209ENST00000470356 RHOBTB2Q9BYZ6 727 aa34.5■■■■□ 3.11
HMG20B-209ENST00000470356 CACNG4Q9UBN1 327 aa34.5■■■■□ 3.11
HMG20B-209ENST00000470356 K7ERI5 159 aa34.49■■■■□ 3.11
HMG20B-209ENST00000470356 BRD1O95696 1058 aa34.49■■■■□ 3.11
HMG20B-209ENST00000470356 NHLH1Q02575 133 aa34.49■■■■□ 3.11
HMG20B-209ENST00000470356 ATF7IP2Q5U623 682 aa34.49■■■■□ 3.11
HMG20B-209ENST00000470356 RIN2Q8WYP3 895 aaPredicted RBP34.49■■■■□ 3.11
HMG20B-209ENST00000470356 CXCL16Q9H2A7 254 aa34.49■■■■□ 3.11
HMG20B-209ENST00000470356 SF3B1O75533 1304 aaKnown RBP eCLIP34.49■■■■□ 3.11
HMG20B-209ENST00000470356 CDC25AP30304 524 aa34.48■■■■□ 3.11
HMG20B-209ENST00000470356 CREMQ03060 361 aa34.48■■■■□ 3.11
HMG20B-209ENST00000470356 NAB2Q15742 525 aa34.48■■■■□ 3.11
HMG20B-209ENST00000470356 MMTAG2Q9BU76 263 aaKnown RBP34.48■■■■□ 3.11
HMG20B-209ENST00000470356 KMT2EQ8IZD2 1858 aa34.48■■■■□ 3.11
HMG20B-209ENST00000470356 CCDC195A0A1B0GUA6 201 aa34.47■■■■□ 3.11
HMG20B-209ENST00000470356 CASTOR2A6NHX0 329 aa34.47■■■■□ 3.11
HMG20B-209ENST00000470356 ASGR2P07307 311 aa34.47■■■■□ 3.11
HMG20B-209ENST00000470356 IER5LQ5T953 404 aa34.47■■■■□ 3.11
HMG20B-209ENST00000470356 APBB1IPQ7Z5R6 666 aaPredicted RBP34.47■■■■□ 3.11
HMG20B-209ENST00000470356 PALB2Q86YC2 1186 aa34.47■■■■□ 3.11
HMG20B-209ENST00000470356 DAW1Q8N136 415 aa34.47■■■■□ 3.11
HMG20B-209ENST00000470356 PRRX2Q99811 253 aa34.47■■■■□ 3.11
HMG20B-209ENST00000470356 PLEKHA4Q9H4M7 779 aa34.47■■■■□ 3.11
HMG20B-209ENST00000470356 UPF2Q9HAU5 1272 aaKnown RBP34.47■■■■□ 3.11
HMG20B-209ENST00000470356 GDAQ9Y2T3 454 aa34.47■■■■□ 3.11
HMG20B-209ENST00000470356 CCDC169A6NNP5 214 aa34.46■■■■□ 3.11
HMG20B-209ENST00000470356 CD2BP2O95400 341 aaKnown RBP34.46■■■■□ 3.11
HMG20B-209ENST00000470356 NPTX2P47972 431 aa34.46■■■■□ 3.11
HMG20B-209ENST00000470356 PEX3P56589 373 aa34.46■■■■□ 3.11
HMG20B-209ENST00000470356 ATP2C1P98194 919 aaPredicted RBP34.46■■■■□ 3.11
HMG20B-209ENST00000470356 LILRA6Q6PI73 481 aa34.46■■■■□ 3.11
HMG20B-209ENST00000470356 TNFSF13BQ9Y275 285 aa34.46■■■■□ 3.11
HMG20B-209ENST00000470356 TGM5O43548 720 aa34.45■■■■□ 3.11
HMG20B-209ENST00000470356 HIP1RO75146 1068 aa34.45■■■■□ 3.11
HMG20B-209ENST00000470356 KIF4AO95239 1232 aa34.45■■■■□ 3.11
HMG20B-209ENST00000470356 PAPLNO95428 1278 aa34.45■■■■□ 3.11
HMG20B-209ENST00000470356 SPATA31D3P0C874 917 aa34.45■■■■□ 3.11
HMG20B-209ENST00000470356 GJB2P29033 226 aa34.45■■■■□ 3.11
HMG20B-209ENST00000470356 RINT1Q6NUQ1 792 aa34.45■■■■□ 3.11
HMG20B-209ENST00000470356 SPATA31D4Q6ZUB0 917 aa34.45■■■■□ 3.11
HMG20B-209ENST00000470356 C1orf186Q6ZWK4 172 aa34.45■■■■□ 3.11
HMG20B-209ENST00000470356 DRC1Q96MC2 740 aa34.45■■■■□ 3.11
HMG20B-209ENST00000470356 RUSC1Q9BVN2 902 aa34.45■■■■□ 3.11
HMG20B-209ENST00000470356 TMEM134Q9H6X4 195 aa34.45■■■■□ 3.11
HMG20B-209ENST00000470356 DMP1Q13316 513 aaPredicted RBP34.44■■■■□ 3.1
HMG20B-209ENST00000470356 RTP2Q5QGT7 225 aa34.44■■■■□ 3.1
HMG20B-209ENST00000470356 KCNK18Q7Z418 384 aa34.44■■■■□ 3.1
HMG20B-209ENST00000470356 HASPINQ8TF76 798 aa34.44■■■■□ 3.1
HMG20B-209ENST00000470356 TTPALQ9BTX7 342 aa34.44■■■■□ 3.1
HMG20B-209ENST00000470356 C17orf75Q9HAS0 396 aa34.44■■■■□ 3.1
HMG20B-209ENST00000470356 WDR6Q9NNW5 1121 aaKnown RBP34.44■■■■□ 3.1
HMG20B-209ENST00000470356 H3BQV1 296 aa34.43■■■■□ 3.1
HMG20B-209ENST00000470356 RFPL2O75678 378 aa34.43■■■■□ 3.1
HMG20B-209ENST00000470356 MYBP10242 640 aa34.43■■■■□ 3.1
HMG20B-209ENST00000470356 RPL17P18621 184 aaKnown RBP34.43■■■■□ 3.1
HMG20B-209ENST00000470356 MCM2P49736 904 aa34.43■■■■□ 3.1
HMG20B-209ENST00000470356 FAM171A1Q5VUB5 890 aa34.43■■■■□ 3.1
HMG20B-209ENST00000470356 KCTD17Q8N5Z5 321 aa34.43■■■■□ 3.1
HMG20B-209ENST00000470356 ACO2Q99798 780 aaKnown RBP34.43■■■■□ 3.1
HMG20B-209ENST00000470356 SMOC2Q9H3U7 446 aa34.43■■■■□ 3.1
HMG20B-209ENST00000470356 ARHGAP28Q9P2N2 729 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms