RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 KLK14Q9P0G3 267 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 PARP2Q9UGN5 583 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 CPSF3Q9UKF6 684 aaKnown RBP11.52□□□□□ -0.57
SMC1A-206ENST00000470241 GIT1Q9Y2X7 761 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.51□□□□□ -0.57
SMC1A-206ENST00000470241 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.51□□□□□ -0.57
SMC1A-206ENST00000470241 A0A1W2PPC1 479 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 GOLGA8IPA6NC78 632 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 TRIM49BA6NDI0 452 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 GOLGA8JA6NMD2 632 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 PSMA7O14818 248 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 KIAA0391O15091 583 aaKnown RBP11.51□□□□□ -0.57
SMC1A-206ENST00000470241 INPPL1O15357 1258 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 HOXA2O43364 376 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 CALUO43852 315 aaPredicted RBP11.51□□□□□ -0.57
SMC1A-206ENST00000470241 EXTL3O43909 919 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 NR3C1P04150 777 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 CLTAP09496 248 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 CCNE1P24864 410 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 MLH1P40692 756 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 CYP2J2P51589 502 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 STIM1Q13586 685 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 ENOX2Q16206 610 aaKnown RBP11.51□□□□□ -0.57
SMC1A-206ENST00000470241 NFIL3Q16649 462 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 KYAT1Q16773 422 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 SLC10A6Q3KNW5 377 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 ANKRD40Q6AI12 368 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 KLHL10Q6JEL2 608 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 SLC9A9Q8IVB4 645 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 GPD1LQ8N335 351 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 GSTCDQ8NEC7 633 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 NELFBQ8WX92 580 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 FBXL18Q96ME1 805 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 ACAP3Q96P50 834 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 MED15Q96RN5 788 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 RAD9AQ99638 391 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 FAM213AQ9BRX8 229 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 TMEM117Q9H0C3 514 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 UBN1Q9NPG3 1134 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 MIOSQ9NXC5 875 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 CTNND2Q9UQB3 1225 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 MICAL3Q7RTP6 2002 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 COL4A6Q14031 1691 aa11.51□□□□□ -0.57
SMC1A-206ENST00000470241 LCHNA4D1U4 455 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 ARL5CA6NH57 179 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 TBKBP1A7MCY6 615 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 TLL1O43897 1013 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 LDHAP00338 332 aaKnown RBP11.5□□□□□ -0.57
SMC1A-206ENST00000470241 ADRB2P07550 413 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 CXCL8P10145 99 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 MYOGP15173 224 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 PBX2P40425 430 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 STX17P56962 302 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 PAK1Q13153 545 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 MYBPC2Q14324 1141 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 EDRF1Q3B7T1 1238 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 PAN2Q504Q3 1202 aaKnown RBP11.5□□□□□ -0.57
SMC1A-206ENST00000470241 XKR4Q5GH76 650 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 NOMO2Q5JPE7 1267 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 TTI2Q6NXR4 508 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 SASS6Q6UVJ0 657 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 GLB1LQ6UWU2 654 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 ALKAL1Q6UXT8 129 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 LRRC55Q6ZSA7 311 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 CBWD2Q8IUF1 395 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 CMTR2Q8IYT2 770 aaKnown RBP11.5□□□□□ -0.57
SMC1A-206ENST00000470241 XXYLT1Q8NBI6 393 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
SMC1A-206ENST00000470241 SNX27Q96L92 541 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 ZFP42Q96MM3 310 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 YME1L1Q96TA2 773 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 DUSP9Q99956 384 aaKnown RBP11.5□□□□□ -0.57
SMC1A-206ENST00000470241 ZBED2Q9BTP6 218 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 FUCA2Q9BTY2 467 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 INPP5FQ9Y2H2 1132 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 YBX2Q9Y2T7 364 aaKnown RBP11.5□□□□□ -0.57
SMC1A-206ENST00000470241 INSL6Q9Y581 213 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 TTC3P53804 2025 aa11.5□□□□□ -0.57
SMC1A-206ENST00000470241 TTC26A0AVF1 554 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 SYCE3A1L190 88 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 PTGESO14684 152 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 EXOC3O60645 756 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 ARHGEF15O94989 841 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 LETM1O95202 739 aaPredicted RBP11.49□□□□□ -0.57
SMC1A-206ENST00000470241 POMCP01189 267 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 NR2F2P24468 414 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 CASP4P49662 377 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 SCNN1GP51170 649 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 YARSP54577 528 aaKnown RBP11.49□□□□□ -0.57
SMC1A-206ENST00000470241 WNT7BP56706 349 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 POU5F1Q01860 360 aaKnown RBP11.49□□□□□ -0.57
SMC1A-206ENST00000470241 LRRC63Q05C16 580 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 TYRO3Q06418 890 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 ADAM9Q13443 819 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 STX1AQ16623 288 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 ZSCAN23Q3MJ62 389 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 LRIT3Q3SXY7 679 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 FOXR2Q6PJQ5 311 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 BRSK2Q8IWQ3 736 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 ZC3H3Q8IXZ2 948 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms