RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 PPM1JQ5JR12 505 aa10.17□□□□□ -0.78
CCDC171-204ENST00000470191 RTP2Q5QGT7 225 aa10.17□□□□□ -0.78
CCDC171-204ENST00000470191 MTSS1LQ765P7 747 aa10.17□□□□□ -0.78
CCDC171-204ENST00000470191 GPR161Q8N6U8 529 aaKnown RBP10.17□□□□□ -0.78
CCDC171-204ENST00000470191 CNNM3Q8NE01 707 aa10.17□□□□□ -0.78
CCDC171-204ENST00000470191 MCRS1Q96EZ8 462 aa10.17□□□□□ -0.78
CCDC171-204ENST00000470191 PAAF1Q9BRP4 392 aa10.17□□□□□ -0.78
CCDC171-204ENST00000470191 RTKNQ9BST9 563 aa10.17□□□□□ -0.78
CCDC171-204ENST00000470191 NCOA5Q9HCD5 579 aaKnown RBP10.17□□□□□ -0.78
CCDC171-204ENST00000470191 HEBP1Q9NRV9 189 aa10.17□□□□□ -0.78
CCDC171-204ENST00000470191 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC171-204ENST00000470191 FNIP2Q9P278 1114 aa10.17□□□□□ -0.78
CCDC171-204ENST00000470191 WRAP73Q9P2S5 460 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-204ENST00000470191 GMEB2Q9UKD1 530 aa10.17□□□□□ -0.78
CCDC171-204ENST00000470191 ZFP37Q9Y6Q3 630 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-204ENST00000470191 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.16□□□□□ -0.78
CCDC171-204ENST00000470191 CASTOR2A6NHX0 329 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 ZBTB39O15060 712 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 ADAM12O43184 909 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 C8AP07357 584 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 QARSP47897 775 aaKnown RBP10.16□□□□□ -0.78
CCDC171-204ENST00000470191 EMC2Q15006 297 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 PSMD5Q16401 504 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 Q4G0T1 1027 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 FAM171A1Q5VUB5 890 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 NOTUMQ6P988 496 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 PRR23BQ6ZRT6 265 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 FERMT3Q86UX7 667 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 ZBTB44Q8NCP5 570 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 SLC7A14Q8TBB6 771 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 ETNPPLQ8TBG4 499 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 DDX23Q9BUQ8 820 aaKnown RBP10.16□□□□□ -0.78
CCDC171-204ENST00000470191 PLA2G2FQ9BZM2 168 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 CSRNP2Q9H175 543 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 EPC1Q9H2F5 836 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 DDX25Q9UHL0 483 aaKnown RBP10.16□□□□□ -0.78
CCDC171-204ENST00000470191 FBXW11Q9UKB1 542 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 RAB23Q9ULC3 237 aa10.16□□□□□ -0.78
CCDC171-204ENST00000470191 NCAM2O15394 837 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 B4GALT5O43286 388 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 SLC37A4O43826 429 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 TBC1D4O60343 1298 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 XYLBO75191 536 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 ADRB1P08588 477 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 RFC5P40937 340 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 PFKPQ01813 784 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 CREMQ03060 361 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 NCBP1Q09161 790 aaKnown RBP10.15□□□□□ -0.78
CCDC171-204ENST00000470191 MTAPQ13126 283 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 HSP90AA2PQ14568 343 aaPredicted RBP10.15□□□□□ -0.78
CCDC171-204ENST00000470191 INF2Q27J81 1249 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 NCAPH2Q6IBW4 605 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 B3GNT9Q6UX72 402 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 SKAP1Q86WV1 359 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 HACE1Q8IYU2 909 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 TCP11Q8WWU5 503 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 DYDC2Q96IM9 177 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 JAKMIP1Q96N16 626 aaKnown RBP10.15□□□□□ -0.78
CCDC171-204ENST00000470191 MBOAT7Q96N66 472 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 CLSTN3Q9BQT9 956 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 DHX33Q9H6R0 707 aaKnown RBP10.15□□□□□ -0.78
CCDC171-204ENST00000470191 RGL1Q9NZL6 768 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 DNMT3BQ9UBC3 853 aaKnown RBP10.15□□□□□ -0.78
CCDC171-204ENST00000470191 GIT1Q9Y2X7 761 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 TRIP11Q15643 1979 aa10.15□□□□□ -0.78
CCDC171-204ENST00000470191 SF3B1O75533 1304 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC171-204ENST00000470191 MARCH6O60337 910 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 LILRB5O75023 590 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 KIF4AO95239 1232 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 P4HBP07237 508 aaKnown RBP10.14□□□□□ -0.79
CCDC171-204ENST00000470191 HNRNPA1P09651 372 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC171-204ENST00000470191 ARF4P18085 180 aaPredicted RBP10.14□□□□□ -0.79
CCDC171-204ENST00000470191 TGM1P22735 817 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 AXLP30530 894 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 YWHABP31946 246 aaKnown RBP10.14□□□□□ -0.79
CCDC171-204ENST00000470191 OR1D2P34982 312 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 MAGEA9P43362 315 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 RCAN1P53805 252 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 CYP4A11Q02928 519 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 GRIK3Q13003 919 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 CTTNQ14247 550 aaKnown RBP10.14□□□□□ -0.79
CCDC171-204ENST00000470191 GRM2Q14416 872 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 KRT32Q14532 448 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 NTRK3Q16288 839 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 PABPC1LQ4VXU2 614 aaKnown RBP10.14□□□□□ -0.79
CCDC171-204ENST00000470191 AXDND1Q5T1B0 1012 aaPredicted RBP10.14□□□□□ -0.79
CCDC171-204ENST00000470191 ZNF852Q6ZMS4 543 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 IFNLR1Q8IU57 520 aaPredicted RBP10.14□□□□□ -0.79
CCDC171-204ENST00000470191 NPAS3Q8IXF0 933 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 BLIDQ8IZY5 108 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 MTRQ99707 1265 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 LXNQ9BS40 222 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 TTPALQ9BTX7 342 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 RNF26Q9BY78 433 aaPredicted RBP10.14□□□□□ -0.79
CCDC171-204ENST00000470191 OSBPL6Q9BZF3 934 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 PCDHA4Q9UN74 947 aa10.14□□□□□ -0.79
CCDC171-204ENST00000470191 MRPS23Q9Y3D9 190 aaKnown RBP10.14□□□□□ -0.79
CCDC171-204ENST00000470191 KIF26AQ9ULI4 1882 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-204ENST00000470191 CYP3A7-CYP3A51PA0A087WV96 503 aa10.13□□□□□ -0.79
CCDC171-204ENST00000470191 A0A087WWV3 80 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms