RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 CDCA5Q96FF9 252 aa6.5□□□□□ -1.37
CCDC144A-212ENST00000470068 TRAIPQ9BWF2 469 aa6.5□□□□□ -1.37
CCDC144A-212ENST00000470068 MRPL4Q9BYD3 311 aaKnown RBP6.5□□□□□ -1.37
CCDC144A-212ENST00000470068 KRCC1Q9NPI7 259 aaPredicted RBP6.5□□□□□ -1.37
CCDC144A-212ENST00000470068 STARD7Q9NQZ5 370 aa6.5□□□□□ -1.37
CCDC144A-212ENST00000470068 RRN3P2A6NIE6 340 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 ENO4A6NNW6 628 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 ACADSP16219 412 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 TIMM10P62072 90 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 MRPS35P82673 323 aaKnown RBP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 SCRN1Q12765 414 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 LRMPQ12912 555 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 ACAP1Q15027 740 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 LRRC23Q53EV4 343 aaPredicted RBP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 UGT3A1Q6NUS8 523 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 ELMOD1Q8N336 334 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 IL17REQ8NFR9 667 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 TRPC4APQ8TEL6 797 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 C19orf60Q96EN9 201 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 CYTH2Q99418 400 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 XAB2Q9HCS7 855 aaKnown RBP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 FAM207AQ9NSI2 230 aaPredicted RBP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 PDP2Q9P2J9 529 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 HPCAL4Q9UM19 191 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 PNMA6EA0A0J9YXQ4 647 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 RASSF10A6NK89 507 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 COPEO14579 308 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 MYL3P08590 195 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 GSPT1P15170 499 aaKnown RBP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 TTKP33981 857 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 FDFT1P37268 417 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 HSPA9P38646 679 aaKnown RBP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 YWHAGP61981 247 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 GUCY2DQ02846 1103 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 DNAJC3Q13217 504 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 RAB30Q15771 203 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 KNOP1Q1ED39 458 aaKnown RBP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 PREPLQ4J6C6 727 aaPredicted RBP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 PPP2R2DQ66LE6 453 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 ANKS3Q6ZW76 656 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 NIPA1Q7RTP0 329 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 SP8Q8IXZ3 490 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 TGFBRAP1Q8WUH2 860 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 PHKBQ93100 1093 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 SCYL1Q96KG9 808 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 OLFM1Q99784 485 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 ANO3Q9BYT9 981 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 RAD18Q9NS91 495 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 RNF186Q9NXI6 227 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 TMX2Q9Y320 296 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 MYO3AQ8NEV4 1616 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 NCAM2O15394 837 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 HOXA2O43364 376 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 SMIM24O75264 130 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 STIP1P31948 543 aaKnown RBP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 RFC1P35251 1148 aaPredicted RBP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 NDUFA8P51970 172 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 PNOCQ13519 176 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 CASP8Q14790 479 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 TMED2Q15363 201 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 HHIPL2Q6UWX4 724 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 PARP9Q8IXQ6 854 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 C12orf50Q8NA57 414 aaPredicted RBP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 HDAC11Q96DB2 347 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 FAM212AQ96EL1 285 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 TMEM237Q96Q45 408 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 SH3GL1Q99961 368 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 ISCA1Q9BUE6 129 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 STK33Q9BYT3 514 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 CCDC134Q9H6E4 229 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 GID8Q9NWU2 228 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 BARHL2Q9NY43 387 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 VPS54Q9P1Q0 977 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 DPYSL4O14531 572 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 OPHN1O60890 802 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 MOCS3O95396 460 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 MYL4P12829 197 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 CCND1P24385 295 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 GUCY2CP25092 1073 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 U2AF2P26368 475 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 MAPK1P28482 360 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 NNMTP40261 264 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 CDR2Q01850 454 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 ITIH4Q14624 930 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 MTERF2Q49AM1 385 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 ZNF544Q6NX49 715 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 PRMT9Q6P2P2 845 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 PDXDC2PQ6P474 469 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 SESTD1Q86VW0 696 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 PGBD3Q8N328 593 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 PPM1KQ8N3J5 372 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 KIF12Q96FN5 646 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 ATP6V1G3Q96LB4 118 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 STRBPQ96SI9 672 aaKnown RBP6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 TMX1Q9H3N1 280 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 GMEB2Q9UKD1 530 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 SLC4A7Q9Y6M7 1214 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 ZNF536O15090 1300 aa6.49□□□□□ -1.37
CCDC144A-212ENST00000470068 CD163L1Q9NR16 1453 aa6.48□□□□□ -1.37
CCDC144A-212ENST00000470068 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms