RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 ATP8B4Q8TF62 1192 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 ATXN2LQ8WWM7 1075 aaKnown RBP10.32□□□□□ -0.76
HDAC3-205ENST00000469550 LBHD1Q9BQE6 289 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-205ENST00000469550 PABPC3Q9H361 631 aaKnown RBP10.32□□□□□ -0.76
HDAC3-205ENST00000469550 KCTD10Q9H3F6 313 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 MKNK2Q9HBH9 465 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 GOPCQ9HD26 462 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 SEC63Q9UGP8 760 aaKnown RBP10.32□□□□□ -0.76
HDAC3-205ENST00000469550 PPP1R9AQ9ULJ8 1098 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 MYH4Q9Y623 1939 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 MYH7BA7E2Y1 1941 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 OPLAHO14841 1288 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 CETN3O15182 167 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 TTI1O43156 1089 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 PTENP60484 403 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 ARID5AQ03989 594 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 KCNH2Q12809 1159 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 DUPD1Q68J44 220 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 BTNL9Q6UXG8 535 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 KCNK18Q7Z418 384 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 SPICE1Q8N0Z3 855 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 NAP1L3Q99457 506 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-205ENST00000469550 NSRP1Q9H0G5 558 aaKnown RBP10.32□□□□□ -0.76
HDAC3-205ENST00000469550 NT5C3AQ9H0P0 336 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 ZNF287Q9HBT7 754 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 KCNMB3Q9NPA1 279 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 ZDHHC18Q9NUE0 388 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 ZNF214Q9UL59 606 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-205ENST00000469550 SYNPO2Q9UMS6 1093 aa10.32□□□□□ -0.76
HDAC3-205ENST00000469550 KDM3AQ9Y4C1 1321 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 VWA5AO00534 786 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 CAND2O75155 1236 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 AGTP01019 485 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 MMEP08473 750 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 ITGA4P13612 1032 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 UCHL3P15374 230 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 CHN1P15882 459 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 IRX1P78414 480 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-205ENST00000469550 ADAM9Q13443 819 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 DHX34Q14147 1143 aaKnown RBP10.31□□□□□ -0.76
HDAC3-205ENST00000469550 PLS1Q14651 629 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 ZKSCAN8Q15776 578 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-205ENST00000469550 ZNF792Q3KQV3 632 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 GJC2Q5T442 439 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-205ENST00000469550 C6orf118Q5T5N4 469 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 TRPM8Q7Z2W7 1104 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 CEP120Q8N960 986 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 NEK9Q8TD19 979 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 SPAG5Q96R06 1193 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 MMP19Q99542 508 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 ERP44Q9BS26 406 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 STMN4Q9H169 189 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-205ENST00000469550 ADAM7Q9H2U9 754 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 EPB41L4BQ9H329 900 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.31□□□□□ -0.76
HDAC3-205ENST00000469550 SAMD15Q9P1V8 674 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 NYAP2Q9P242 653 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 BAIAP2L1Q9UHR4 511 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 PNMA2Q9UL42 364 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 PHF24Q9UPV7 400 aa10.31□□□□□ -0.76
HDAC3-205ENST00000469550 SMCHD1A6NHR9 2005 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 IGKV6D-41A0A0C4DH26 115 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 FRMD3A2A2Y4 597 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 ATP2A1O14983 1001 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 EDIL3O43854 480 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 BUB1BO60566 1050 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-205ENST00000469550 ZNF131P52739 623 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 ATN1P54259 1190 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-205ENST00000469550 LMNB2Q03252 620 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 ADCY2Q08462 1091 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 TNFAIP8L3Q5GJ75 292 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 Q7L0L9 218 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 GBP7Q8N8V2 638 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-205ENST00000469550 MDM1Q8TC05 714 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 SCFD1Q8WVM8 642 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 CARD9Q9H257 536 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 RIOX1Q9H6W3 641 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 FBXO28Q9NVF7 368 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 PRKAG2Q9UGJ0 569 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 AMFRQ9UKV5 643 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 TRPC6Q9Y210 931 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 ATP8A1Q9Y2Q0 1164 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 C15orf41Q9Y2V0 281 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 PLIN4Q96Q06 1357 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 POTEMA6NI47 508 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 BACH1O14867 736 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 SLC37A4O43826 429 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 ATP2C2O75185 946 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 AFPP02771 609 aaKnown RBP10.3□□□□□ -0.76
HDAC3-205ENST00000469550 RASA1P20936 1047 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 PAX7P23759 505 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 STAT3P40763 770 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 NOVP48745 357 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 PMS2P54278 862 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 JAM2P57087 298 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 KLRC3Q07444 240 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 KCTD2Q14681 263 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 DENND2CQ68D51 928 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 NEDD1Q8NHV4 660 aa10.3□□□□□ -0.76
HDAC3-205ENST00000469550 TINF2Q9BSI4 451 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms