RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 TMEM39AQ9NV64 488 aa7.47□□□□□ -1.21
CD46-212ENST00000469535 BARHL2Q9NY43 387 aa7.47□□□□□ -1.21
CD46-212ENST00000469535 IP6K2Q9UHH9 426 aa7.47□□□□□ -1.21
CD46-212ENST00000469535 GPC5P78333 572 aa7.46□□□□□ -1.21
CD46-212ENST00000469535 RBP5P82980 135 aa7.46□□□□□ -1.21
CD46-212ENST00000469535 MAP1SQ66K74 1059 aaPredicted RBP7.46□□□□□ -1.21
CD46-212ENST00000469535 PLA2G4FQ68DD2 849 aa7.46□□□□□ -1.21
CD46-212ENST00000469535 KRT39Q6A163 491 aa7.46□□□□□ -1.21
CD46-212ENST00000469535 EMSYQ7Z589 1322 aa7.46□□□□□ -1.21
CD46-212ENST00000469535 PP2D1A8MPX8 630 aa7.46□□□□□ -1.21
CD46-212ENST00000469535 STXBP3O00186 592 aa7.46□□□□□ -1.21
CD46-212ENST00000469535 APOL1O14791 398 aa7.46□□□□□ -1.21
CD46-212ENST00000469535 KPNA1P52294 538 aaPredicted RBP7.46□□□□□ -1.21
CD46-212ENST00000469535 BFSP2Q13515 415 aa7.46□□□□□ -1.21
CD46-212ENST00000469535 SV2CQ496J9 727 aa7.46□□□□□ -1.21
CD46-212ENST00000469535 TDRD10Q5VZ19 366 aaKnown RBP7.46□□□□□ -1.21
CD46-212ENST00000469535 TTC39CQ8N584 583 aa7.46□□□□□ -1.21
CD46-212ENST00000469535 STN1Q9H668 368 aaKnown RBP7.46□□□□□ -1.21
CD46-212ENST00000469535 ARHGAP31Q2M1Z3 1444 aa7.46□□□□□ -1.21
CD46-212ENST00000469535 NDUFB10O96000 172 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 HIST1H2AGP0C0S8 130 aaPredicted RBP7.46□□□□□ -1.22
CD46-212ENST00000469535 HIST1H2ADP20671 130 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 KCNH2Q12809 1159 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 EMC2Q15006 297 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 FASTKD1Q53R41 847 aaKnown RBP7.46□□□□□ -1.22
CD46-212ENST00000469535 COBLL1Q53SF7 1204 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 ATPAF2Q8N5M1 289 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 PPHLN1Q8NEY8 458 aaKnown RBP7.46□□□□□ -1.22
CD46-212ENST00000469535 ASAP3Q8TDY4 903 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 HIST1H2AHQ96KK5 128 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 HIST1H2AJQ99878 128 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 H2AFJQ9BTM1 129 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 FAM49BQ9NUQ9 324 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 KLHL11Q9NVR0 708 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 NAGPAQ9UK23 515 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 VEGFAP15692 232 aaPredicted RBP7.46□□□□□ -1.22
CD46-212ENST00000469535 TMPRSS15P98073 1019 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 CDH18Q13634 790 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 EPHA7Q15375 998 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 CEP55Q53EZ4 464 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 ATP11CQ8NB49 1132 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 TTC13Q8NBP0 860 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 ATG4CQ96DT6 458 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 TRIM15Q9C019 465 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 ERAP1Q9NZ08 941 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 SEL1LQ9UBV2 794 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 PCDHGB4Q9UN71 923 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 TTC37Q6PGP7 1564 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 NCAPD2Q15021 1401 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 ALDH1A2O94788 518 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 NR3C2P08235 984 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 NMT1P30419 496 aaKnown RBP7.46□□□□□ -1.22
CD46-212ENST00000469535 CAPZA2P47755 286 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 CENPAP49450 140 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 ZBED6P86452 979 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 XKR3Q5GH77 459 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 FAM151AQ8WW52 585 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 MTFR1LQ9H019 292 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 CAPN7Q9Y6W3 813 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 MAGEB2O15479 319 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 TLR2O60603 784 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 LARGE1O95461 756 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 CD4P01730 458 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 MRPS25P82663 173 aaKnown RBP7.46□□□□□ -1.22
CD46-212ENST00000469535 PRKCEQ02156 737 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 SPDYAQ5MJ70 313 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 CDKL3Q8IVW4 592 aaPredicted RBP7.46□□□□□ -1.22
CD46-212ENST00000469535 SLC25A41Q8N5S1 370 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 HIPK4Q8NE63 616 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 CEP19Q96LK0 163 aa7.46□□□□□ -1.22
CD46-212ENST00000469535 KDM6AO15550 1401 aaPredicted RBP7.46□□□□□ -1.22
CD46-212ENST00000469535 A0A1B0GUA9 196 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 NDUFB5O43674 189 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 URODP06132 367 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 MBL2P11226 248 aaPredicted RBP7.45□□□□□ -1.22
CD46-212ENST00000469535 CSE1LP55060 971 aaKnown RBP7.45□□□□□ -1.22
CD46-212ENST00000469535 ZNF445P59923 1031 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 CCDC15Q0P6D6 951 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 AMHR2Q16671 573 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 KIZQ2M2Z5 673 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 CRLF3Q8IUI8 442 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 HASPINQ8TF76 798 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 PPP1R13BQ96KQ4 1090 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 AGBL1Q96MI9 1066 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 CCDC151A5D8V7 595 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 KRT37O76014 449 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 PGK2P07205 417 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 PPM1NQ8N819 430 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 SCFD2Q8WU76 684 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 OPTNQ96CV9 577 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 ZFYVE19Q96K21 471 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 PPP1R9AQ9ULJ8 1098 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 IPPQ9Y573 584 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 ITIH6Q6UXX5 1313 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 IQSEC2Q5JU85 1478 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 KPNA7A9QM74 516 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 CTNND1O60716 968 aaKnown RBP7.45□□□□□ -1.22
CD46-212ENST00000469535 GRAP2O75791 330 aa7.45□□□□□ -1.22
CD46-212ENST00000469535 NLRP11P59045 1033 aaKnown RBP7.45□□□□□ -1.22
CD46-212ENST00000469535 PDAP1Q13442 181 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms