RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 OXER1Q8TDS5 423 aa17.19■□□□□ 0.34
SRRM1-207ENST00000468822 TCP11Q8WWU5 503 aa17.19■□□□□ 0.34
SRRM1-207ENST00000468822 CCDC51Q96ER9 411 aa17.19■□□□□ 0.34
SRRM1-207ENST00000468822 MTRQ99707 1265 aa17.19■□□□□ 0.34
SRRM1-207ENST00000468822 CLSTN3Q9BQT9 956 aa17.19■□□□□ 0.34
SRRM1-207ENST00000468822 DDX23Q9BUQ8 820 aaKnown RBP17.19■□□□□ 0.34
SRRM1-207ENST00000468822 CXCL16Q9H2A7 254 aa17.19■□□□□ 0.34
SRRM1-207ENST00000468822 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.19■□□□□ 0.34
SRRM1-207ENST00000468822 GIT1Q9Y2X7 761 aa17.19■□□□□ 0.34
SRRM1-207ENST00000468822 MYH15Q9Y2K3 1946 aa17.19■□□□□ 0.34
SRRM1-207ENST00000468822 CHD8Q9HCK8 2581 aa17.18■□□□□ 0.34
SRRM1-207ENST00000468822 FAM205CA6NFA0 338 aa17.18■□□□□ 0.34
SRRM1-207ENST00000468822 DKC1O60832 514 aaKnown RBP eCLIP17.18■□□□□ 0.34
SRRM1-207ENST00000468822 NCAPH2Q6IBW4 605 aa17.18■□□□□ 0.34
SRRM1-207ENST00000468822 ZC3H14Q6PJT7 736 aaKnown RBP17.18■□□□□ 0.34
SRRM1-207ENST00000468822 GPR65Q8IYL9 337 aa17.18■□□□□ 0.34
SRRM1-207ENST00000468822 ITFG1Q8TB96 612 aa17.18■□□□□ 0.34
SRRM1-207ENST00000468822 HASPINQ8TF76 798 aa17.18■□□□□ 0.34
SRRM1-207ENST00000468822 FBXW11Q9UKB1 542 aa17.18■□□□□ 0.34
SRRM1-207ENST00000468822 CDH7Q9ULB5 785 aa17.18■□□□□ 0.34
SRRM1-207ENST00000468822 CCNT1O60563 726 aaKnown RBP17.17■□□□□ 0.34
SRRM1-207ENST00000468822 NR1I2O75469 434 aa17.17■□□□□ 0.34
SRRM1-207ENST00000468822 SLITRK3O94933 977 aa17.17■□□□□ 0.34
SRRM1-207ENST00000468822 NPTXRO95502 500 aa17.17■□□□□ 0.34
SRRM1-207ENST00000468822 GLRA2P23416 452 aa17.17■□□□□ 0.34
SRRM1-207ENST00000468822 IGFBP6P24592 240 aaPredicted RBP17.17■□□□□ 0.34
SRRM1-207ENST00000468822 ARL2P36404 184 aa17.17■□□□□ 0.34
SRRM1-207ENST00000468822 STK3Q13188 491 aa17.17■□□□□ 0.34
SRRM1-207ENST00000468822 PCBP1Q15365 356 aaKnown RBP eCLIP17.17■□□□□ 0.34
SRRM1-207ENST00000468822 RSPO4Q2I0M5 234 aaPredicted RBP17.17■□□□□ 0.34
SRRM1-207ENST00000468822 GALNT17Q6IS24 598 aa17.17■□□□□ 0.34
SRRM1-207ENST00000468822 RUFY3Q7L099 469 aa17.17■□□□□ 0.34
SRRM1-207ENST00000468822 OTUD6AQ7L8S5 288 aa17.17■□□□□ 0.34
SRRM1-207ENST00000468822 NEK8Q86SG6 692 aa17.17■□□□□ 0.34
SRRM1-207ENST00000468822 FGF13Q92913 245 aa17.17■□□□□ 0.34
SRRM1-207ENST00000468822 PHF20Q9BVI0 1012 aa17.17■□□□□ 0.34
SRRM1-207ENST00000468822 ZSWIM4Q9H7M6 989 aa17.17■□□□□ 0.34
SRRM1-207ENST00000468822 A0A087WWV3 80 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 KANSL1LA0AUZ9 987 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 TTLL13PA6NNM8 815 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 CCL16O15467 120 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 TADA2AO75478 443 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 KIF4AO95239 1232 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 CD72P21854 359 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 PSMA5P28066 241 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 GRIK3Q13003 919 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 HSP90AA2PQ14568 343 aaPredicted RBP17.16■□□□□ 0.34
SRRM1-207ENST00000468822 MXD4Q14582 209 aaPredicted RBP17.16■□□□□ 0.34
SRRM1-207ENST00000468822 POTEHQ6S545 545 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 PIK3AP1Q6ZUJ8 805 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 TPH2Q8IWU9 490 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 LNX1Q8TBB1 728 aaPredicted RBP17.16■□□□□ 0.34
SRRM1-207ENST00000468822 TRIM6Q9C030 488 aaPredicted RBP17.16■□□□□ 0.34
SRRM1-207ENST00000468822 ZSWIM6Q9HCJ5 1215 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 NOTCH4Q99466 2003 aa17.16■□□□□ 0.34
SRRM1-207ENST00000468822 MIA3Q5JRA6 1907 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 CFAP47Q6ZTR5 3102 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 PATJQ8NI35 1801 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 A0A1B0GUA9 196 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 CCDC194A0A1B0GVG4 234 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 CASTOR2A6NHX0 329 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 CPLX1O14810 134 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 TBX3O15119 743 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 C8AP07357 584 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 POU5F1BQ06416 359 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 MLF2Q15773 248 aaPredicted RBP17.15■□□□□ 0.34
SRRM1-207ENST00000468822 SLC44A4Q53GD3 710 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 SLC27A1Q6PCB7 646 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 PIK3R5Q8WYR1 880 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 ZNF274Q96GC6 653 aaPredicted RBP17.15■□□□□ 0.34
SRRM1-207ENST00000468822 HSD17B14Q9BPX1 270 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 KXD1Q9BQD3 176 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 SPATA6Q9NWH7 488 aaPredicted RBP17.15■□□□□ 0.34
SRRM1-207ENST00000468822 HCFC1R1Q9NWW0 138 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 PARP2Q9UGN5 583 aa17.15■□□□□ 0.34
SRRM1-207ENST00000468822 ZFP37Q9Y6Q3 630 aaPredicted RBP17.15■□□□□ 0.34
SRRM1-207ENST00000468822 SF3B1O75533 1304 aaKnown RBP eCLIP17.15■□□□□ 0.34
SRRM1-207ENST00000468822 SHISA7A6NL88 538 aa17.14■□□□□ 0.33
SRRM1-207ENST00000468822 PTGESO14684 152 aa17.14■□□□□ 0.33
SRRM1-207ENST00000468822 KINO60870 393 aaKnown RBP17.14■□□□□ 0.33
SRRM1-207ENST00000468822 GCFC2P16383 781 aaKnown RBP17.14■□□□□ 0.33
SRRM1-207ENST00000468822 NCBP1Q09161 790 aaKnown RBP17.14■□□□□ 0.33
SRRM1-207ENST00000468822 TFDP1Q14186 410 aa17.14■□□□□ 0.33
SRRM1-207ENST00000468822 UBXN2BQ14CS0 331 aa17.14■□□□□ 0.33
SRRM1-207ENST00000468822 NAB2Q15742 525 aa17.14■□□□□ 0.33
SRRM1-207ENST00000468822 PSMD5Q16401 504 aa17.14■□□□□ 0.33
SRRM1-207ENST00000468822 FAM171A1Q5VUB5 890 aa17.14■□□□□ 0.33
SRRM1-207ENST00000468822 FAM177A1Q8N128 213 aaPredicted RBP17.14■□□□□ 0.33
SRRM1-207ENST00000468822 SHDQ96IW2 340 aa17.14■□□□□ 0.33
SRRM1-207ENST00000468822 CNTNAP3BQ96NU0 1288 aa17.14■□□□□ 0.33
SRRM1-207ENST00000468822 EIF2AK1Q9BQI3 630 aaKnown RBP17.14■□□□□ 0.33
SRRM1-207ENST00000468822 TTPALQ9BTX7 342 aa17.14■□□□□ 0.33
SRRM1-207ENST00000468822 NFKBIZQ9BYH8 718 aa17.14■□□□□ 0.33
SRRM1-207ENST00000468822 CNTNAP3Q9BZ76 1288 aa17.14■□□□□ 0.33
SRRM1-207ENST00000468822 GPRC5CQ9NQ84 441 aa17.14■□□□□ 0.33
SRRM1-207ENST00000468822 VWA8A3KMH1 1905 aa17.13■□□□□ 0.33
SRRM1-207ENST00000468822 FAM170BA6NMN3 283 aa17.13■□□□□ 0.33
SRRM1-207ENST00000468822 KRT37O76014 449 aa17.13■□□□□ 0.33
SRRM1-207ENST00000468822 HNRNPA1P09651 372 aaKnown RBP eCLIP17.13■□□□□ 0.33
SRRM1-207ENST00000468822 CREMQ03060 361 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms