RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 NOP2P46087 812 aaKnown RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 LIMK1P53667 647 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 ITGA8P53708 1063 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 CSE1LP55060 971 aaKnown RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 POLR2FP61218 127 aaKnown RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 AKAP17AQ02040 695 aaKnown RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 GUCY1A3Q02108 690 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 ALDH6A1Q02252 535 aaKnown RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 MAP2K1Q02750 393 aaPredicted RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 ZNF543Q08ER8 600 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 AP1B1Q10567 949 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 MRPL28Q13084 256 aaKnown RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 CUL4AQ13619 759 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 NTRK3Q16288 839 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 PFKFB4Q16877 469 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 SETMARQ53H47 684 aaPredicted RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 HSP90B2PQ58FF3 399 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 RALGPS1Q5JS13 557 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 CDCP2Q5VXM1 449 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 TDRD10Q5VZ19 366 aaKnown RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 LMBR1LQ6UX01 489 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 TTLL7Q6ZT98 887 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 ADAT2Q7Z6V5 191 aaKnown RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 LIX1LQ8IVB5 337 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 SLC44A2Q8IWA5 706 aaPredicted RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 GALNT15Q8N3T1 639 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 ANKS4BQ8N8V4 417 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 AVL9Q8NBF6 648 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 ZMIZ2Q8NF64 920 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 GOT1L1Q8NHS2 421 aaPredicted RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 TAF4BQ92750 862 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 CEP95Q96GE4 821 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 Q96M66 194 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 MOGAT1Q96PD6 335 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 TSGA13Q96PP4 275 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 CNPPD1Q9BV87 410 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 VPS33BQ9H267 617 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 ADAMTS10Q9H324 1103 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 KRT84Q9NSB2 600 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 TMOD4Q9NZQ9 345 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 H2AFY2Q9P0M6 372 aaPredicted RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 POGKQ9P215 609 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 KIF17Q9P2E2 1029 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 EIF2B4Q9UI10 523 aaKnown RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 VPS28Q9UK41 221 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 FBXL5Q9UKA1 691 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 PADI4Q9UM07 663 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 SRPK3Q9UPE1 567 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 SIK3Q9Y2K2 1263 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 MTF2Q9Y483 593 aaPredicted RBP4.14□□□□□ -1.75
CDHR3-206ENST00000468477 CEP83Q9Y592 693 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 PCDHA11Q9Y5I1 949 aa4.14□□□□□ -1.75
CDHR3-206ENST00000468477 ARID1BQ8NFD5 2236 aaPredicted RBP4.13□□□□□ -1.75
CDHR3-206ENST00000468477 POM121BA6NF01 834 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 CHURC1-FNTBB4DL54 471 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 F8W031 263 aaPredicted RBP4.13□□□□□ -1.75
CDHR3-206ENST00000468477 DAPK3O43293 454 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 DNAJA2O60884 412 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 TBCAO75347 108 aaKnown RBP4.13□□□□□ -1.75
CDHR3-206ENST00000468477 FGF18O76093 207 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 GOSR1O95249 250 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 GUCA1CO95843 209 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 HPXP02790 462 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 SRFP11831 508 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 KRT13P13646 458 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 PDCP20941 246 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 ENDOUP21128 410 aaKnown RBP4.13□□□□□ -1.75
CDHR3-206ENST00000468477 C5AR1P21730 350 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 ATP5F1P24539 256 aaPredicted RBP4.13□□□□□ -1.75
CDHR3-206ENST00000468477 HTR1BP28222 390 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 HSPA4P34932 840 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 HADHAP40939 763 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 HNF4AP41235 474 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 POLD2P49005 469 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 SLC12A2P55011 1212 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 ADKP55263 362 aaKnown RBP4.13□□□□□ -1.75
CDHR3-206ENST00000468477 RNASE9P60153 205 aaKnown RBP4.13□□□□□ -1.75
CDHR3-206ENST00000468477 PPARDQ03181 441 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 CALD1Q05682 793 aaKnown RBP4.13□□□□□ -1.75
CDHR3-206ENST00000468477 GALNT1Q10472 559 aaPredicted RBP4.13□□□□□ -1.75
CDHR3-206ENST00000468477 MAPK7Q13164 816 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 BECN1Q14457 450 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 SEMA3AQ14563 771 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 SNX17Q15036 470 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 RASA2Q15283 850 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 SF1Q15637 639 aaKnown RBP4.13□□□□□ -1.75
CDHR3-206ENST00000468477 TIGD6Q17RP2 521 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 FAM110CQ1W6H9 321 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 UAP1L1Q3KQV9 507 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 ZACNQ401N2 412 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 MMEL1Q495T6 779 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 KAZNQ674X7 775 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 GPR139Q6DWJ6 353 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 IRGCQ6NXR0 463 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 JMJD6Q6NYC1 403 aaPredicted RBP4.13□□□□□ -1.75
CDHR3-206ENST00000468477 RPUSD3Q6P087 351 aaKnown RBP4.13□□□□□ -1.75
CDHR3-206ENST00000468477 CRTC1Q6UUV9 634 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 USP53Q70EK8 1073 aa4.13□□□□□ -1.75
CDHR3-206ENST00000468477 USP45Q70EL2 814 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms