RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 KHSRPQ92945 711 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDHR3-205ENST00000468143 B3GALT6Q96L58 329 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 CDT1Q9H211 546 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 PTPRHQ9HD43 1115 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 KCND2Q9NZV8 630 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
CDHR3-205ENST00000468143 CCDC39Q9UFE4 941 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 FAM50BQ9Y247 325 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 HCFC2Q9Y5Z7 792 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 TRANK1O15050 2925 aa12.68□□□□□ -0.38
CDHR3-205ENST00000468143 TADA2AO75478 443 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 FAM13AO94988 1023 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 THP07101 528 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 MAPTP10636 758 aaKnown RBP12.67□□□□□ -0.38
CDHR3-205ENST00000468143 EPCAMP16422 314 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 PKP1Q13835 747 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 PTPN14Q15678 1187 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 SMAD2Q15796 467 aaKnown RBP12.67□□□□□ -0.38
CDHR3-205ENST00000468143 SEZ6Q53EL9 994 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 RRAGBQ5VZM2 374 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 KANK3Q6NY19 840 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 DYMQ7RTS9 669 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 HAUS6Q7Z4H7 955 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 KRI1Q8N9T8 703 aaKnown RBP12.67□□□□□ -0.38
CDHR3-205ENST00000468143 SMRP1Q8NCR6 262 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 HASPINQ8TF76 798 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 LARP4BQ92615 738 aaKnown RBP12.67□□□□□ -0.38
CDHR3-205ENST00000468143 KLHL5Q96PQ7 755 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 GPR62Q9BZJ7 368 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 MRPL17Q9NRX2 175 aaKnown RBP12.67□□□□□ -0.38
CDHR3-205ENST00000468143 LARSQ9P2J5 1176 aaKnown RBP12.67□□□□□ -0.38
CDHR3-205ENST00000468143 USP15Q9Y4E8 981 aaPredicted RBP12.67□□□□□ -0.38
CDHR3-205ENST00000468143 MYO7AQ13402 2215 aa12.67□□□□□ -0.38
CDHR3-205ENST00000468143 REV3LO60673 3130 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 SOD2P04179 222 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 CNPP09543 421 aaKnown RBP12.66□□□□□ -0.38
CDHR3-205ENST00000468143 SRGAP2BP0DMP2 458 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 ZSCAN22P10073 491 aaPredicted RBP12.66□□□□□ -0.38
CDHR3-205ENST00000468143 MYBP10242 640 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 IGFBP6P24592 240 aaPredicted RBP12.66□□□□□ -0.38
CDHR3-205ENST00000468143 KLRC2P26717 231 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 GRM5P41594 1212 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 NASPP49321 788 aaPredicted RBP12.66□□□□□ -0.38
CDHR3-205ENST00000468143 NCKAP1LP55160 1127 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 TUSC3Q13454 348 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 NAB2Q15742 525 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 SYCE2Q6PIF2 218 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 MPZL3Q6UWV2 235 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 TMEM184AQ6ZMB5 413 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 APBB1IPQ7Z5R6 666 aaPredicted RBP12.66□□□□□ -0.38
CDHR3-205ENST00000468143 C12orf76Q8N812 135 aaPredicted RBP12.66□□□□□ -0.38
CDHR3-205ENST00000468143 LINC00301Q8NCQ3 95 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 CASP10Q92851 521 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 ZNF396Q96N95 335 aaPredicted RBP12.66□□□□□ -0.38
CDHR3-205ENST00000468143 HERC2P3Q9BVR0 1158 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 CCDC94Q9BW85 323 aaPredicted RBP12.66□□□□□ -0.38
CDHR3-205ENST00000468143 S1PR5Q9H228 398 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 EPHX3Q9H6B9 360 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 ANKFY1Q9P2R3 1169 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 KCNG1Q9UIX4 513 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 CDH22Q9UJ99 828 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 ODF2LQ9ULJ1 636 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 IRAK3Q9Y616 596 aa12.66□□□□□ -0.38
CDHR3-205ENST00000468143 A0A087X0B3 334 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 SMIM28A0A1B0GU29 152 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 K7ENM7 598 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 ABLIM1O14639 778 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 SPTLC2O15270 562 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 TRAK2O60296 914 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 LILRB3O75022 631 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 TBCAO75347 108 aaKnown RBP12.65□□□□□ -0.38
CDHR3-205ENST00000468143 EFEMP2O95967 443 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 F13A1P00488 732 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 URODP06132 367 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 WEE2P0C1S8 567 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 MCF2P10911 925 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 PROZP22891 400 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 NMT1P30419 496 aaKnown RBP12.65□□□□□ -0.38
CDHR3-205ENST00000468143 TXLNAP40222 546 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 MATR3P43243 847 aaKnown RBP eCLIP12.65□□□□□ -0.38
CDHR3-205ENST00000468143 YARSP54577 528 aaKnown RBP12.65□□□□□ -0.38
CDHR3-205ENST00000468143 ZP2Q05996 745 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 HSP90AA2PQ14568 343 aaPredicted RBP12.65□□□□□ -0.38
CDHR3-205ENST00000468143 KIAA0319Q5VV43 1072 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 KIAA1841Q6NSI8 718 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 FUT10Q6P4F1 479 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 ADHFE1Q8IWW8 467 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 PDILTQ8N807 584 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 FEZF2Q8TBJ5 459 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 SLC22A17Q8WUG5 538 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 BICD1Q96G01 975 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 ACAP3Q96P50 834 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 EMILIN2Q9BXX0 1053 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 PARVGQ9HBI0 331 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 GOLGA2P5Q9HBQ8 144 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 ADAM28Q9UKQ2 775 aa12.65□□□□□ -0.38
CDHR3-205ENST00000468143 XIRP2A4UGR9 3374 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 FSD2A1L4K1 749 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 MYMKA6NI61 221 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 CLDN3O15551 220 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms