RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 BPIFA3Q9BQP9 254 aa16.08■□□□□ 0.16
DDX56-208ENST00000467318 EIF2AQ9BY44 585 aaKnown RBP16.08■□□□□ 0.16
DDX56-208ENST00000467318 HAPLN2Q9GZV7 340 aa16.08■□□□□ 0.16
DDX56-208ENST00000467318 HSPBP1Q9NZL4 362 aa16.08■□□□□ 0.16
DDX56-208ENST00000467318 PCDHB2Q9Y5E7 798 aa16.08■□□□□ 0.16
DDX56-208ENST00000467318 CEP290O15078 2479 aa16.07■□□□□ 0.16
DDX56-208ENST00000467318 LTBP2Q14767 1821 aa16.07■□□□□ 0.16
DDX56-208ENST00000467318 TRIM49BA6NDI0 452 aa16.07■□□□□ 0.16
DDX56-208ENST00000467318 C9IYK1 514 aa16.07■□□□□ 0.16
DDX56-208ENST00000467318 CETN3O15182 167 aa16.07■□□□□ 0.16
DDX56-208ENST00000467318 NPTXRO95502 500 aa16.07■□□□□ 0.16
DDX56-208ENST00000467318 EOMESO95936 686 aa16.07■□□□□ 0.16
DDX56-208ENST00000467318 ACRP10323 421 aa16.07■□□□□ 0.16
DDX56-208ENST00000467318 STX17P56962 302 aa16.07■□□□□ 0.16
DDX56-208ENST00000467318 FAM189BP81408 668 aa16.07■□□□□ 0.16
DDX56-208ENST00000467318 C11orf57Q6ZUT1 292 aaPredicted RBP16.07■□□□□ 0.16
DDX56-208ENST00000467318 GPD1LQ8N335 351 aa16.07■□□□□ 0.16
DDX56-208ENST00000467318 FBXL18Q96ME1 805 aa16.07■□□□□ 0.16
DDX56-208ENST00000467318 PCIF1Q9H4Z3 704 aa16.07■□□□□ 0.16
DDX56-208ENST00000467318 EXTL3O43909 919 aa16.06■□□□□ 0.16
DDX56-208ENST00000467318 EXOC3O60645 756 aa16.06■□□□□ 0.16
DDX56-208ENST00000467318 GRM5P41594 1212 aa16.06■□□□□ 0.16
DDX56-208ENST00000467318 C16orf59Q7L2K0 433 aa16.06■□□□□ 0.16
DDX56-208ENST00000467318 MRPL10Q7Z7H8 261 aaKnown RBP16.06■□□□□ 0.16
DDX56-208ENST00000467318 ZC3H3Q8IXZ2 948 aaKnown RBP16.06■□□□□ 0.16
DDX56-208ENST00000467318 THNSL1Q8IYQ7 743 aa16.06■□□□□ 0.16
DDX56-208ENST00000467318 CSGALNACT2Q8N6G5 542 aa16.06■□□□□ 0.16
DDX56-208ENST00000467318 SPC24Q8NBT2 197 aa16.06■□□□□ 0.16
DDX56-208ENST00000467318 LINC01599Q8WXQ3 324 aa16.06■□□□□ 0.16
DDX56-208ENST00000467318 PGBD4Q96DM1 585 aa16.06■□□□□ 0.16
DDX56-208ENST00000467318 CEP63Q96MT8 703 aa16.06■□□□□ 0.16
DDX56-208ENST00000467318 CCDC94Q9BW85 323 aaPredicted RBP16.06■□□□□ 0.16
DDX56-208ENST00000467318 ELAC1Q9H777 363 aaKnown RBP16.06■□□□□ 0.16
DDX56-208ENST00000467318 FRMD4BQ9Y2L6 1034 aa16.06■□□□□ 0.16
DDX56-208ENST00000467318 IPPQ9Y573 584 aa16.06■□□□□ 0.16
DDX56-208ENST00000467318 FAM189A1O60320 539 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 CLTAP09496 248 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 HARSP12081 509 aaKnown RBP16.05■□□□□ 0.16
DDX56-208ENST00000467318 CYP2J2P51589 502 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 TPM4P67936 248 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 TPD52L1Q16890 204 aaPredicted RBP16.05■□□□□ 0.16
DDX56-208ENST00000467318 TMEM240Q5SV17 173 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 SPATA1Q5VX52 437 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 ZNF365Q70YC5 407 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 ECHDC2Q86YB7 292 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 SMG8Q8ND04 991 aaKnown RBP16.05■□□□□ 0.16
DDX56-208ENST00000467318 MYRIPQ8NFW9 859 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 ACAP3Q96P50 834 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 MED15Q96RN5 788 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 DUSP9Q99956 384 aaKnown RBP16.05■□□□□ 0.16
DDX56-208ENST00000467318 MKNK1Q9BUB5 465 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 PDCL3Q9H2J4 239 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 MTIF3Q9H2K0 278 aaKnown RBP16.05■□□□□ 0.16
DDX56-208ENST00000467318 UBN1Q9NPG3 1134 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.05■□□□□ 0.16
DDX56-208ENST00000467318 ZNF233A6NK53 670 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 SMTNL1A8MU46 457 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 IKBKBO14920 756 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 MAPK13O15264 365 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 STAG3L1P0CL83 205 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 MAGEA10P43363 369 aaPredicted RBP16.05■□□□□ 0.16
DDX56-208ENST00000467318 EPHB4P54760 987 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 MYL5Q02045 173 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 OTOP2Q7RTS6 562 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 FILIP1Q7Z7B0 1213 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 NOC3LQ8WTT2 800 aaKnown RBP16.05■□□□□ 0.16
DDX56-208ENST00000467318 FAM213AQ9BRX8 229 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 SRRTQ9BXP5 876 aaKnown RBP16.05■□□□□ 0.16
DDX56-208ENST00000467318 NXF3Q9H4D5 531 aaKnown RBP16.05■□□□□ 0.16
DDX56-208ENST00000467318 TOPORSQ9NS56 1045 aaPredicted RBP16.05■□□□□ 0.16
DDX56-208ENST00000467318 TMEM161AQ9NX61 479 aa16.05■□□□□ 0.16
DDX56-208ENST00000467318 CPSF3Q9UKF6 684 aaKnown RBP16.05■□□□□ 0.16
DDX56-208ENST00000467318 GNA14O95837 355 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 ITGA4P13612 1032 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 PSMC2P35998 433 aaKnown RBP16.04■□□□□ 0.16
DDX56-208ENST00000467318 ACOT2P49753 483 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 YARSP54577 528 aaKnown RBP16.04■□□□□ 0.16
DDX56-208ENST00000467318 SNRNP35Q16560 246 aaKnown RBP16.04■□□□□ 0.16
DDX56-208ENST00000467318 CEP135Q66GS9 1140 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 CRELD2Q6UXH1 353 aaPredicted RBP16.04■□□□□ 0.16
DDX56-208ENST00000467318 LRRC55Q6ZSA7 311 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 CCDC186Q7Z3E2 898 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 ZNF598Q86UK7 904 aaKnown RBP16.04■□□□□ 0.16
DDX56-208ENST00000467318 CEP120Q8N960 986 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 HERVK_113Q902F9 699 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 SAAL1Q96ER3 474 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.04■□□□□ 0.166e-8■■■□□ 15.1
DDX56-208ENST00000467318 PLEKHA5Q9HAU0 1116 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 SNTG2Q9NY99 539 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 GIT1Q9Y2X7 761 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 HES2Q9Y543 173 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 PCDHB7Q9Y5E2 793 aa16.04■□□□□ 0.16
DDX56-208ENST00000467318 TTC3P53804 2025 aa16.03■□□□□ 0.16
DDX56-208ENST00000467318 SLC16A3O15427 465 aaKnown RBP16.03■□□□□ 0.16
DDX56-208ENST00000467318 AMHP03971 560 aa16.03■□□□□ 0.16
DDX56-208ENST00000467318 EPB41P11171 864 aaKnown RBP16.03■□□□□ 0.16
DDX56-208ENST00000467318 KCNJ6P48051 423 aa16.03■□□□□ 0.16
DDX56-208ENST00000467318 OSTNP61366 133 aa16.03■□□□□ 0.16
DDX56-208ENST00000467318 WDR5P61964 334 aaKnown RBP16.03■□□□□ 0.16
DDX56-208ENST00000467318 NPAS4Q8IUM7 802 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms