RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 HMX1Q9NP08 348 aaPredicted RBP16.61■□□□□ 0.25
SNED1-208ENST00000466618 SLC39A2Q9NP94 309 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.61■□□□□ 0.25
SNED1-208ENST00000466618 STK24Q9Y6E0 443 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 GOLGA6L10A6NI86 522 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 KLRC4O43908 158 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 MYBP10242 640 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 RPA1P27694 616 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 GJA9P57773 515 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 SP4Q02446 784 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 ZNF844Q08AG5 666 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 MYO1EQ12965 1108 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 LHX8Q68G74 356 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 BZW1Q7L1Q6 419 aaKnown RBP16.61■□□□□ 0.25
SNED1-208ENST00000466618 CATSPER3Q86XQ3 398 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 AFG1LQ8WV93 481 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 SPDL1Q96EA4 605 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 THOC1Q96FV9 657 aaKnown RBP16.61■□□□□ 0.25
SNED1-208ENST00000466618 PCMTD1Q96MG8 357 aaPredicted RBP16.61■□□□□ 0.25
SNED1-208ENST00000466618 PCYT2Q99447 389 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 KRT12Q99456 494 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 POLR3CQ9BUI4 534 aaPredicted RBP16.61■□□□□ 0.25
SNED1-208ENST00000466618 RNF14Q9UBS8 474 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 TCEAL9Q9UHQ7 104 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 BAIAP2L1Q9UHR4 511 aa16.61■□□□□ 0.25
SNED1-208ENST00000466618 EPHB6O15197 1021 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 SLC26A4O43511 780 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 BUB1BO60566 1050 aaPredicted RBP16.6■□□□□ 0.25
SNED1-208ENST00000466618 MED24O75448 989 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 SUPT20HL2P0C7V6 817 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 DRD4P21917 467 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 UBA7P41226 1012 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 ECM1Q16610 540 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 KRT79Q5XKE5 535 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 HIBCHQ6NVY1 386 aaPredicted RBP16.6■□□□□ 0.25
SNED1-208ENST00000466618 CRELD2Q6UXH1 353 aaPredicted RBP16.6■□□□□ 0.25
SNED1-208ENST00000466618 CABP7Q86V35 215 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 NOC3LQ8WTT2 800 aaKnown RBP16.6■□□□□ 0.25
SNED1-208ENST00000466618 EEF2KMTQ96G04 330 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 RGL1Q9NZL6 768 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 C15orf41Q9Y2V0 281 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 BRCA2P51587 3418 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 RAD51CO43502 376 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 ADAMTS4O75173 837 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 LGR5O75473 907 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 PSAPP07602 524 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 RARBP10826 455 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 TCF7P36402 384 aaPredicted RBP16.6■□□□□ 0.25
SNED1-208ENST00000466618 PPP2R2AP63151 447 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 MIS18BP1Q6P0N0 1132 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 CCDC60Q8IWA6 550 aaPredicted RBP16.6■□□□□ 0.25
SNED1-208ENST00000466618 ERMNQ8TAM6 284 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 NEK9Q8TD19 979 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 SNX29Q8TEQ0 813 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 ARMC5Q96C12 935 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 DYDC2Q96IM9 177 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 CNOT6LQ96LI5 555 aaKnown RBP16.6■□□□□ 0.25
SNED1-208ENST00000466618 PNMA5Q96PV4 448 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 TUFT1Q9NNX1 390 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 PAK6Q9NQU5 681 aaPredicted RBP16.6■□□□□ 0.25
SNED1-208ENST00000466618 WRAP73Q9P2S5 460 aaPredicted RBP16.6■□□□□ 0.25
SNED1-208ENST00000466618 TRPC6Q9Y210 931 aa16.6■□□□□ 0.25
SNED1-208ENST00000466618 NOP56O00567 594 aaKnown RBP16.59■□□□□ 0.25
SNED1-208ENST00000466618 BUB1O43683 1085 aa16.59■□□□□ 0.25
SNED1-208ENST00000466618 MSCO60682 206 aa16.59■□□□□ 0.25
SNED1-208ENST00000466618 P4HBP07237 508 aaKnown RBP16.59■□□□□ 0.25
SNED1-208ENST00000466618 MMP3P08254 477 aa16.59■□□□□ 0.25
SNED1-208ENST00000466618 ADCY2Q08462 1091 aa16.59■□□□□ 0.25
SNED1-208ENST00000466618 GRB10Q13322 594 aa16.59■□□□□ 0.25
SNED1-208ENST00000466618 KCNB1Q14721 858 aa16.59■□□□□ 0.25
SNED1-208ENST00000466618 UGCGQ16739 394 aa16.59■□□□□ 0.25
SNED1-208ENST00000466618 GKAP1Q5VSY0 366 aaPredicted RBP16.59■□□□□ 0.25
SNED1-208ENST00000466618 CSGALNACT2Q8N6G5 542 aa16.59■□□□□ 0.25
SNED1-208ENST00000466618 ZNF333Q96JL9 665 aa16.59■□□□□ 0.25
SNED1-208ENST00000466618 UNC93B1Q9H1C4 597 aa16.59■□□□□ 0.25
SNED1-208ENST00000466618 SPATS2LQ9NUQ6 558 aaKnown RBP16.59■□□□□ 0.25
SNED1-208ENST00000466618 MAFBQ9Y5Q3 323 aaPredicted RBP16.59■□□□□ 0.25
SNED1-208ENST00000466618 PSMA7O14818 248 aa16.58■□□□□ 0.25
SNED1-208ENST00000466618 MUTP22033 750 aa16.58■□□□□ 0.25
SNED1-208ENST00000466618 MAGEA1P43355 309 aa16.58■□□□□ 0.25
SNED1-208ENST00000466618 BIRC3Q13489 604 aa16.58■□□□□ 0.25
SNED1-208ENST00000466618 MTFR1Q15390 333 aa16.58■□□□□ 0.25
SNED1-208ENST00000466618 PPP1R7Q15435 360 aa16.58■□□□□ 0.25
SNED1-208ENST00000466618 TMEM119Q4V9L6 283 aa16.58■□□□□ 0.25
SNED1-208ENST00000466618 NAALADL2Q58DX5 795 aa16.58■□□□□ 0.25
SNED1-208ENST00000466618 SWSAP1Q6NVH7 229 aa16.58■□□□□ 0.25
SNED1-208ENST00000466618 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.58■□□□□ 0.25
SNED1-208ENST00000466618 EMSYQ7Z589 1322 aa16.58■□□□□ 0.24
SNED1-208ENST00000466618 IGSF9BQ9UPX0 1349 aa16.58■□□□□ 0.24
SNED1-208ENST00000466618 GRID2IPA4D2P6 1211 aa16.58■□□□□ 0.24
SNED1-208ENST00000466618 LYPLA2O95372 231 aa16.58■□□□□ 0.24
SNED1-208ENST00000466618 QARSP47897 775 aaKnown RBP16.58■□□□□ 0.24
SNED1-208ENST00000466618 CYP4A11Q02928 519 aa16.58■□□□□ 0.24
SNED1-208ENST00000466618 RIPK1Q13546 671 aa16.58■□□□□ 0.24
SNED1-208ENST00000466618 GPIHBP1Q8IV16 184 aa16.58■□□□□ 0.24
SNED1-208ENST00000466618 LRRC15Q8TF66 581 aa16.58■□□□□ 0.24
SNED1-208ENST00000466618 NOX5Q96PH1 765 aa16.58■□□□□ 0.24
SNED1-208ENST00000466618 SH3GL3Q99963 347 aa16.58■□□□□ 0.24
SNED1-208ENST00000466618 NOC4LQ9BVI4 516 aaKnown RBP16.58■□□□□ 0.24
SNED1-208ENST00000466618 AP5M1Q9H0R1 490 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms