RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 KCTD17Q8N5Z5 321 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 BCL7CQ8WUZ0 217 aaPredicted RBP10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 AUTS2Q8WXX7 1259 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 HLA-CQ95604 372 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 DHX58Q96C10 678 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 ZBTB45Q96K62 511 aaPredicted RBP10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 MRPL4Q9BYD3 311 aaKnown RBP10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 CDT1Q9H211 546 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 CXCL16Q9H2A7 254 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 UBE2ZQ9H832 354 aaPredicted RBP10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 PARVGQ9HBI0 331 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 KCND2Q9NZV8 630 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 TBC1D7Q9P0N9 293 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 LARSQ9P2J5 1176 aaKnown RBP10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 ARHGAP28Q9P2N2 729 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 STK17AQ9UEE5 414 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 PUF60Q9UHX1 559 aaKnown RBP10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 ODF2LQ9ULJ1 636 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 ZDHHC9Q9Y397 364 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 PLXNA3P51805 1871 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 SPTBN5Q9NRC6 3674 aaKnown RBP10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 CASTOR2A6NHX0 329 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 F8W810 466 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 TULP1O00294 542 aaPredicted RBP10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 NRP1O14786 923 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 TRAK2O60296 914 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 CUTAO60888 179 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 GALTP07902 379 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 PDIA4P13667 645 aaKnown RBP10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 NMT1P30419 496 aaKnown RBP10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 NDUFV1P49821 464 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 NCKAP1LP55160 1127 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 NUCB2P80303 420 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 PLCB3Q01970 1234 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 UBE3AQ05086 875 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 HYAL1Q12794 435 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 DCAF4L1Q3SXM0 396 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 LLGL2Q6P1M3 1020 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 SHC4Q6S5L8 630 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 HAUS6Q7Z4H7 955 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 SFR1Q86XK3 245 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 FAM178BQ8IXR5 827 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 TMEM161BQ8NDZ6 487 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 KCNG4Q8TDN1 519 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 HASPINQ8TF76 798 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 DDX12PQ92771 950 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 PPP2R3CQ969Q6 453 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 ACO2Q99798 780 aaKnown RBP10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 TMEM134Q9H6X4 195 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 C17orf75Q9HAS0 396 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 UBN1Q9NPG3 1134 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 CFAP45Q9UL16 551 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 PCDHA7Q9UN72 937 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 FAN1Q9Y2M0 1017 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 GIT1Q9Y2X7 761 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 VWA8A3KMH1 1905 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 PRUNE2Q8WUY3 3088 aa10.68□□□□□ -0.7
RTFDC1-205ENST00000466260 MYMKA6NI61 221 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 HIDE1A8MVS5 230 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 C2CD2LO14523 706 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 ALDH2P05091 517 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 MAPTP10636 758 aaKnown RBP10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 MCM4P33991 863 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 LIG4P49917 911 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 KRT85P78386 507 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 MRPS5P82675 430 aaKnown RBP10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 RBM10P98175 930 aaKnown RBP10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 GRIK3Q13003 919 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 ZC2HC1CQ53FD0 456 aaPredicted RBP10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 VPS52Q8N1B4 723 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 SPIRE2Q8WWL2 714 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 ATXN2LQ8WWM7 1075 aaKnown RBP10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 IGSF21Q96ID5 467 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 SPATA32Q96LK8 384 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 CCDC94Q9BW85 323 aaPredicted RBP10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 TLE6Q9H808 572 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 GDPD2Q9HCC8 539 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 FAM13BQ9NYF5 915 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 KANSL3Q9P2N6 904 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 COG5Q9UP83 839 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 TNFSF13BQ9Y275 285 aa10.67□□□□□ -0.7
RTFDC1-205ENST00000466260 TRANK1O15050 2925 aa10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 BRWD1Q9NSI6 2320 aa10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 PTGESO14684 152 aa10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 HNRNPDLO14979 420 aaKnown RBP10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 POLR2DO15514 142 aaKnown RBP10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 TBX10O75333 385 aa10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 GCNT3O95395 438 aa10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 YARSP54577 528 aaKnown RBP10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 DLX2Q07687 328 aaPredicted RBP10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 SMC1AQ14683 1233 aaKnown RBP10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 NOLC1Q14978 699 aaKnown RBP eCLIP10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 TJAP1Q5JTD0 557 aa10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 MPZL3Q6UWV2 235 aa10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 APBB1IPQ7Z5R6 666 aaPredicted RBP10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 COLGALT2Q8IYK4 626 aa10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 TMEM87AQ8NBN3 555 aa10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 GSTCDQ8NEC7 633 aa10.66□□□□□ -0.7
RTFDC1-205ENST00000466260 PABPC5Q96DU9 382 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms