RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 DYDC2Q96IM9 177 aa5.75□□□□□ -1.49
LRCH3-211ENST00000466054 KCTD10Q9H3F6 313 aa5.75□□□□□ -1.49
LRCH3-211ENST00000466054 SYNPO2LQ9H987 977 aa5.75□□□□□ -1.49
LRCH3-211ENST00000466054 NCDNQ9UBB6 729 aa5.75□□□□□ -1.49
LRCH3-211ENST00000466054 PRSS50Q9UI38 385 aa5.75□□□□□ -1.49
LRCH3-211ENST00000466054 ALDH1L1O75891 902 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 SCAF4O95104 1147 aaKnown RBP5.74□□□□□ -1.49
LRCH3-211ENST00000466054 S100BP04271 92 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-211ENST00000466054 MYBL2P10244 700 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 GNAT2P19087 354 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 XPAP23025 273 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-211ENST00000466054 IARSP41252 1262 aaKnown RBP5.74□□□□□ -1.49
LRCH3-211ENST00000466054 NEK2P51955 445 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 SLC5A3P53794 718 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 NRG3P56975 720 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 ABCB5Q2M3G0 1257 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 ANO4Q32M45 955 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 SP5Q6BEB4 398 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-211ENST00000466054 FBXO42Q6P3S6 717 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 KCNK18Q7Z418 384 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 LYSMD2Q8IV50 215 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 LCORLQ8N3X6 602 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 PPP1R14CQ8TAE6 165 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 GAB3Q8WWW8 586 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 CHMP4CQ96CF2 233 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 FUBP3Q96I24 572 aaKnown RBP eCLIP5.74□□□□□ -1.49
LRCH3-211ENST00000466054 FAXDC2Q96IV6 333 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 PAWRQ96IZ0 340 aaKnown RBP5.74□□□□□ -1.49
LRCH3-211ENST00000466054 GPHA2Q96T91 129 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 METTL14Q9HCE5 456 aaKnown RBP5.74□□□□□ -1.49
LRCH3-211ENST00000466054 DNAJC28Q9NX36 388 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 MKS1Q9NXB0 559 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 INSL6Q9Y581 213 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 CDY2AQ9Y6F7 541 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 TNKSO95271 1327 aa5.74□□□□□ -1.49
LRCH3-211ENST00000466054 FZD9O00144 591 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 SEC24DO94855 1032 aaPredicted RBP5.73□□□□□ -1.49
LRCH3-211ENST00000466054 LPLP06858 475 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 GYPEP15421 78 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 CTGFP29279 349 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 AVPR1BP47901 424 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 MTNR1BP49286 362 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 EPHB1P54762 984 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 LGALS4P56470 323 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 ANTXR2P58335 489 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 PPARAQ07869 468 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 TRIM25Q14258 630 aaKnown RBP5.73□□□□□ -1.49
LRCH3-211ENST00000466054 TTF1Q15361 905 aaPredicted RBP5.73□□□□□ -1.49
LRCH3-211ENST00000466054 TOR2AQ5JU69 321 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 PGM2L1Q6PCE3 622 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 MICALCLQ6ZW33 695 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 ZBTB46Q86UZ6 589 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 GLB1L2Q8IW92 636 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 TGFBRAP1Q8WUH2 860 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 NKD2Q969F2 451 aaPredicted RBP5.73□□□□□ -1.49
LRCH3-211ENST00000466054 WDR92Q96MX6 357 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 SMAD5Q99717 465 aaKnown RBP5.73□□□□□ -1.49
LRCH3-211ENST00000466054 QRSL1Q9H0R6 528 aaKnown RBP5.73□□□□□ -1.49
LRCH3-211ENST00000466054 R3HDMLQ9H3Y0 253 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 USP18Q9UMW8 372 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 MRFAP1Q9Y605 127 aa5.73□□□□□ -1.49
LRCH3-211ENST00000466054 E2F8A0AVK6 867 aa5.72□□□□□ -1.49
LRCH3-211ENST00000466054 FSBPO95073 299 aa5.72□□□□□ -1.49
LRCH3-211ENST00000466054 MT-CO1P00395 513 aa5.72□□□□□ -1.49
LRCH3-211ENST00000466054 AGXTP21549 392 aa5.72□□□□□ -1.49
LRCH3-211ENST00000466054 NR4A1P22736 598 aa5.72□□□□□ -1.49
LRCH3-211ENST00000466054 SRSF2Q01130 221 aaKnown RBP5.72□□□□□ -1.49
LRCH3-211ENST00000466054 PTPN21Q16825 1174 aa5.72□□□□□ -1.49
LRCH3-211ENST00000466054 MUM1Q2TAK8 710 aa5.72□□□□□ -1.49
LRCH3-211ENST00000466054 ODR4Q5SWX8 454 aa5.72□□□□□ -1.49
LRCH3-211ENST00000466054 SPATA5L1Q9BVQ7 753 aa5.72□□□□□ -1.49
LRCH3-211ENST00000466054 ZNF277Q9NRM2 450 aaPredicted RBP5.72□□□□□ -1.49
LRCH3-211ENST00000466054 DPP7Q9UHL4 492 aa5.72□□□□□ -1.49
LRCH3-211ENST00000466054 EDARQ9UNE0 448 aa5.72□□□□□ -1.49
LRCH3-211ENST00000466054 GPR45Q9Y5Y3 372 aa5.72□□□□□ -1.49
LRCH3-211ENST00000466054 HS3ST4Q9Y661 456 aa5.72□□□□□ -1.49
LRCH3-211ENST00000466054 KLHL33A6NCF5 533 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 DAPK3O43293 454 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 CCND1P24385 295 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 CLK3P49761 638 aaKnown RBP5.71□□□□□ -1.5
LRCH3-211ENST00000466054 GAGE13Q4V321 117 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.71□□□□□ -1.5
LRCH3-211ENST00000466054 LMBR1LQ6UX01 489 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 HTR3DQ70Z44 454 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 UNC5BQ8IZJ1 945 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 MDGA1Q8NFP4 955 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 ST8SIA2Q92186 375 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 CAVIN3Q969G5 261 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 ZNF512Q96ME7 567 aaPredicted RBP5.71□□□□□ -1.5
LRCH3-211ENST00000466054 SOX7Q9BT81 388 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 PRDM12Q9H4Q4 367 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 IFT122Q9HBG6 1241 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.71□□□□□ -1.5
LRCH3-211ENST00000466054 EVLQ9UI08 416 aaPredicted RBP5.71□□□□□ -1.5
LRCH3-211ENST00000466054 EIF2B4Q9UI10 523 aaKnown RBP5.71□□□□□ -1.5
LRCH3-211ENST00000466054 DNAI1Q9UI46 699 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 MAGEL2Q9UJ55 1249 aa5.71□□□□□ -1.5
LRCH3-211ENST00000466054 C1RP00736 705 aa5.7□□□□□ -1.5
LRCH3-211ENST00000466054 HK1P19367 917 aa5.7□□□□□ -1.5
LRCH3-211ENST00000466054 RECQLP46063 649 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms