RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.38■■■□□ 2.13
SMC4-206ENST00000465903 LRRC27Q9C0I9 530 aa28.38■■■□□ 2.13
SMC4-206ENST00000465903 PANK4Q9NVE7 773 aa28.38■■■□□ 2.13
SMC4-206ENST00000465903 SEL1LQ9UBV2 794 aa28.38■■■□□ 2.13
SMC4-206ENST00000465903 PUF60Q9UHX1 559 aaKnown RBP28.38■■■□□ 2.13
SMC4-206ENST00000465903 HPSEQ9Y251 543 aa28.38■■■□□ 2.13
SMC4-206ENST00000465903 FAN1Q9Y2M0 1017 aa28.38■■■□□ 2.13
SMC4-206ENST00000465903 CARNS1A5YM72 827 aa28.37■■■□□ 2.13
SMC4-206ENST00000465903 PFKFB1P16118 471 aa28.37■■■□□ 2.13
SMC4-206ENST00000465903 OSTNP61366 133 aa28.37■■■□□ 2.13
SMC4-206ENST00000465903 GRIK3Q13003 919 aa28.37■■■□□ 2.13
SMC4-206ENST00000465903 HERC4Q5GLZ8 1057 aaPredicted RBP28.37■■■□□ 2.13
SMC4-206ENST00000465903 CNNM4Q6P4Q7 775 aa28.37■■■□□ 2.13
SMC4-206ENST00000465903 MAP4K3Q8IVH8 894 aa28.37■■■□□ 2.13
SMC4-206ENST00000465903 SLC17A8Q8NDX2 589 aa28.37■■■□□ 2.13
SMC4-206ENST00000465903 C7orf25Q9BPX7 421 aa28.37■■■□□ 2.13
SMC4-206ENST00000465903 OLFML3Q9NRN5 406 aa28.37■■■□□ 2.13
SMC4-206ENST00000465903 MARCH5Q9NX47 278 aa28.37■■■□□ 2.13
SMC4-206ENST00000465903 TBC1D7Q9P0N9 293 aa28.37■■■□□ 2.13
SMC4-206ENST00000465903 SERTAD1Q9UHV2 236 aa28.37■■■□□ 2.13
SMC4-206ENST00000465903 UNC80Q8N2C7 3258 aa28.37■■■□□ 2.13
SMC4-206ENST00000465903 FAM237AA0A1B0GTK4 181 aa28.36■■■□□ 2.13
SMC4-206ENST00000465903 AMPD3Q01432 767 aa28.36■■■□□ 2.13
SMC4-206ENST00000465903 MCL1Q07820 350 aa28.36■■■□□ 2.13
SMC4-206ENST00000465903 HYAL1Q12794 435 aa28.36■■■□□ 2.13
SMC4-206ENST00000465903 NOLC1Q14978 699 aaKnown RBP eCLIP28.36■■■□□ 2.13
SMC4-206ENST00000465903 NAB2Q15742 525 aa28.36■■■□□ 2.13
SMC4-206ENST00000465903 SLC39A4Q6P5W5 647 aa28.36■■■□□ 2.13
SMC4-206ENST00000465903 ALKAL1Q6UXT8 129 aa28.36■■■□□ 2.13
SMC4-206ENST00000465903 BICD1Q96G01 975 aa28.36■■■□□ 2.13
SMC4-206ENST00000465903 TMEM169Q96HH4 297 aa28.36■■■□□ 2.13
SMC4-206ENST00000465903 RPS6KC1Q96S38 1066 aa28.36■■■□□ 2.13
SMC4-206ENST00000465903 CCDC94Q9BW85 323 aaPredicted RBP28.36■■■□□ 2.13
SMC4-206ENST00000465903 VN1R3Q9BXE9 311 aa28.36■■■□□ 2.13
SMC4-206ENST00000465903 MRPL44Q9H9J2 332 aaKnown RBP28.36■■■□□ 2.13
SMC4-206ENST00000465903 MAGEF1Q9HAY2 307 aa28.36■■■□□ 2.13
SMC4-206ENST00000465903 ANKFY1Q9P2R3 1169 aa28.36■■■□□ 2.13
SMC4-206ENST00000465903 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.35■■■□□ 2.13
SMC4-206ENST00000465903 ANKRD63C9JTQ0 380 aa28.35■■■□□ 2.13
SMC4-206ENST00000465903 CLDN3O15551 220 aa28.35■■■□□ 2.13
SMC4-206ENST00000465903 MEFVO15553 781 aaPredicted RBP28.35■■■□□ 2.13
SMC4-206ENST00000465903 HARSP12081 509 aaKnown RBP28.35■■■□□ 2.13
SMC4-206ENST00000465903 CASP1P29466 404 aa28.35■■■□□ 2.13
SMC4-206ENST00000465903 ABCD1P33897 745 aa28.35■■■□□ 2.13
SMC4-206ENST00000465903 GTF2F1P35269 517 aaKnown RBP eCLIP28.35■■■□□ 2.13
SMC4-206ENST00000465903 COL19A1Q14993 1142 aa28.35■■■□□ 2.13
SMC4-206ENST00000465903 XKR4Q5GH76 650 aa28.35■■■□□ 2.13
SMC4-206ENST00000465903 DDX53Q86TM3 631 aaKnown RBP28.35■■■□□ 2.13
SMC4-206ENST00000465903 MICAL1Q8TDZ2 1067 aa28.35■■■□□ 2.13
SMC4-206ENST00000465903 PYM1Q9BRP8 204 aaKnown RBP28.35■■■□□ 2.13
SMC4-206ENST00000465903 FGFBP2Q9BYJ0 223 aa28.35■■■□□ 2.13
SMC4-206ENST00000465903 IKZF4Q9H2S9 585 aa28.35■■■□□ 2.13
SMC4-206ENST00000465903 THEGQ9P2T0 379 aa28.35■■■□□ 2.13
SMC4-206ENST00000465903 ACTN4O43707 911 aaKnown RBP28.34■■■□□ 2.13
SMC4-206ENST00000465903 OR1G1P47890 313 aa28.34■■■□□ 2.13
SMC4-206ENST00000465903 LIG4P49917 911 aa28.34■■■□□ 2.13
SMC4-206ENST00000465903 CASP5P51878 434 aa28.34■■■□□ 2.13
SMC4-206ENST00000465903 COASYQ13057 564 aa28.34■■■□□ 2.13
SMC4-206ENST00000465903 SEZ6Q53EL9 994 aa28.34■■■□□ 2.13
SMC4-206ENST00000465903 PDE12Q6L8Q7 609 aaKnown RBP28.34■■■□□ 2.13
SMC4-206ENST00000465903 CCDC65Q8IXS2 484 aa28.34■■■□□ 2.13
SMC4-206ENST00000465903 ACAP3Q96P50 834 aa28.34■■■□□ 2.13
SMC4-206ENST00000465903 TCF25Q9BQ70 676 aa28.34■■■□□ 2.13
SMC4-206ENST00000465903 CACNG4Q9UBN1 327 aa28.34■■■□□ 2.13
SMC4-206ENST00000465903 PRG3Q9Y2Y8 225 aaPredicted RBP28.34■■■□□ 2.13
SMC4-206ENST00000465903 A0A1W2PQ27 194 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 A0A1W2PQ64 194 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 A0A1W2PQD8 194 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 F8W810 466 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 HNRNPDLO14979 420 aaKnown RBP28.33■■■□□ 2.13
SMC4-206ENST00000465903 EFEMP2O95967 443 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 THP07101 528 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 SLFN14P0C7P3 912 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 KCNA1Q09470 495 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 TUSC3Q13454 348 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 HLA-CQ95604 372 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 HVCN1Q96D96 273 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 BLZF1Q9H2G9 400 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 COG5Q9UP83 839 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 ANK1P16157 1881 aa28.33■■■□□ 2.13
SMC4-206ENST00000465903 TISP43B9A030 160 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 MYBP10242 640 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 AFMP43652 599 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 ASIC1P78348 528 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 TFF2Q03403 129 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 GLRA4Q5JXX5 417 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 PLPP4Q5VZY2 271 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 TMC7Q7Z402 723 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 GRAMD1CQ8IYS0 662 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 VPS52Q8N1B4 723 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 RABGGTAQ92696 567 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 HPS3Q969F9 1004 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 PPP1R10Q96QC0 940 aaKnown RBP28.32■■■□□ 2.12
SMC4-206ENST00000465903 PAAF1Q9BRP4 392 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 ZBP1Q9H171 429 aa28.32■■■□□ 2.12
SMC4-206ENST00000465903 CIZ1Q9ULV3 898 aaPredicted RBP28.32■■■□□ 2.12
SMC4-206ENST00000465903 TCF20Q9UGU0 1960 aaKnown RBP28.31■■■□□ 2.12
SMC4-206ENST00000465903 A0A0B4J269 797 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 SMIM28A0A1B0GU29 152 aa28.31■■■□□ 2.12
SMC4-206ENST00000465903 HIDE1A8MVS5 230 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms